prot_H-canaliculatus_F_contig13754.2997.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13754.2997.1
Unique Nameprot_H-canaliculatus_F_contig13754.2997.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length34
Homology
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A7S2CGS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CGS5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.320e-15
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGSTE+YPQ +KHNCNGRF+VVCGDGEYIIYTS
Sbjct:   44 DLGSTEIYPQSVKHNCNGRFIVVCGDGEYIIYTS 77          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A7S2DQ04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQ04_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.960e-14
Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGSTE++PQ +KHNCNGRF+VVCGDGEYIIYTS
Sbjct:  264 DLGSTEIFPQCIKHNCNGRFIVVCGDGEYIIYTS 297          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A835YRX4_9STRA (Coatomer WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.280e-13
Identity = 27/34 (79.41%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLG+TE++PQ L+HNCNGRFLVVCGDGEY++YTS
Sbjct:  349 DLGATEIFPQALRHNCNGRFLVVCGDGEYVVYTS 382          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A4D9D3N3_9STRA (Coatomer_WDAD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3N3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.110e-13
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGSTE++PQ L HNCNGRF+VVCGDGEYIIYTS
Sbjct:  364 DLGSTEIFPQTLAHNCNGRFVVVCGDGEYIIYTS 397          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A1E7FWK9_9STRA (Coatomer subunit beta' n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWK9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.260e-13
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGS ELYPQ+LKHNCNGRF+ VCGDGE+IIYTS
Sbjct:  350 DLGSCELYPQMLKHNCNGRFVAVCGDGEFIIYTS 383          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: F0YGS9_AURAN (Coatomer subunit beta' n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGS9_AURAN)

HSP 1 Score: 69.7 bits (169), Expect = 5.820e-13
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            D+GS E++PQV++HNCNGRFLVVCGDGEYIIYTS
Sbjct:  352 DMGSCEIFPQVVQHNCNGRFLVVCGDGEYIIYTS 385          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A7S2N5K4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N5K4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.840e-13
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGS ELYPQ+LKHNCNGRF+ VCGDGE+IIYT+
Sbjct:  347 DLGSCELYPQILKHNCNGRFVAVCGDGEFIIYTA 380          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A7S2SR98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR98_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.940e-13
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGSTE++PQ ++HNCNGRF+VVCGDGEYIIYTS
Sbjct:  371 DLGSTEVFPQQVQHNCNGRFIVVCGDGEYIIYTS 404          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A7S3VAZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAZ1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.090e-12
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLG+ ELYPQ+LKHNCNGRF+ VCGDGE+IIYTS
Sbjct:  264 DLGACELYPQMLKHNCNGRFVAVCGDGEFIIYTS 297          
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Match: A0A7S4RXN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RXN3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.090e-12
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS 34
            DLGS ELYPQ+LKHNCNGRF+ VCGDGE+IIYT+
Sbjct:  132 DLGSCELYPQMLKHNCNGRFVAVCGDGEFIIYTA 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13754.2997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2CGS5_9STRA3.320e-1588.24Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2DQ04_9STRA8.960e-1485.29Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835YRX4_9STRA2.280e-1379.41Coatomer WD associated region-domain-containing pr... [more]
A0A4D9D3N3_9STRA3.110e-1385.29Coatomer_WDAD domain-containing protein n=2 Tax=Mo... [more]
A0A1E7FWK9_9STRA4.260e-1385.29Coatomer subunit beta' n=1 Tax=Fragilariopsis cyli... [more]
F0YGS9_AURAN5.820e-1382.35Coatomer subunit beta' n=1 Tax=Aureococcus anophag... [more]
A0A7S2N5K4_9STRA5.840e-1382.35Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S2SR98_9STRA7.940e-1382.35Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3VAZ1_9STRA1.090e-1282.35Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S4RXN3_9STRA1.090e-1282.35Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006692Coatomer, WD associated regionPFAMPF04053Coatomer_WDADcoord: 1..33
e-value: 1.6E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR19876:SF25coord: 1..33
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13754contigH-canaliculatus_F_contig13754:767..868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13754.2997.1mRNA_H-canaliculatus_F_contig13754.2997.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13754 767..868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13754.2997.1 ID=prot_H-canaliculatus_F_contig13754.2997.1|Name=mRNA_H-canaliculatus_F_contig13754.2997.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=34bp
DLGSTELYPQVLKHNCNGRFLVVCGDGEYIIYTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006692Coatomer_WD-assoc_reg