prot_H-canaliculatus_F_contig13712.2975.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13712.2975.1
Unique Nameprot_H-canaliculatus_F_contig13712.2975.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length112
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13712.2975.1 vs. uniprot
Match: A0A6H5JTW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW0_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.950e-18
Identity = 55/120 (45.83%), Postives = 68/120 (56.67%), Query Frame = 0 
Query:    1 PGFDDFLRRLGSCGLRYRLHRIAGVLPAEVLEEIRLVVSATIVGGPVKS----------RDADTQTSQACAGNGGGDGSESEGGVIAGLGEAAAGGAGTVAPASGAGFDEFVLCRVFRAS 110
            PGFDDFL RLGSCGLRYRL R++ +LP ++LEEIR   S  IVGGPV S          RD+     + C G  G DG ES    +     A A      A ++   FDEFV+C +FRA+
Sbjct:  274 PGFDDFLHRLGSCGLRYRLRRMSDILPGDLLEEIRRSASIDIVGGPVASSRTPSCVNAARDSVGGAKEDCGGGTGVDGGESPSRSVVAAATADA------AASTCTRFDEFVMCEIFRAT 387
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BLAST of mRNA_H-canaliculatus_F_contig13712.2975.1 vs. uniprot
Match: D8LM85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM85_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.770e-15
Identity = 55/121 (45.45%), Postives = 66/121 (54.55%), Query Frame = 0 
Query:    1 PGFDDFLRRLGSCGLRYRLHRIAGVLPAEVLEEIRLVVSATIVGGPVKS----------RDADTQTSQACAGNGGGDGSES-EGGVIAGLGEAAAGGAGTVAPASGAGFDEFVLCRVFRAS 110
            PGFDDFL RLGSCGLRYRL R++ +LP ++LEEI    S  IVGGPV S          RD+     + C G  G D  +S  G VIA        G  T        FDEFV+C +FRA+
Sbjct:  276 PGFDDFLHRLGSCGLRYRLRRMSDILPGDLLEEIHQSASIDIVGGPVTSSRTPLCVDAARDSVGGGEEDCDGGKGVDAGKSPSGSVIAAXXXXXXAGTCTR-------FDEFVMCEIFRAT 389
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13712.2975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTW0_9PHAE3.950e-1845.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM85_ECTSI1.770e-1545.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13712contigH-canaliculatus_F_contig13712:1095..1430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13712.2975.1mRNA_H-canaliculatus_F_contig13712.2975.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13712 1095..1430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13712.2975.1 ID=prot_H-canaliculatus_F_contig13712.2975.1|Name=mRNA_H-canaliculatus_F_contig13712.2975.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=112bp
PGFDDFLRRLGSCGLRYRLHRIAGVLPAEVLEEIRLVVSATIVGGPVKSR
DADTQTSQACAGNGGGDGSESEGGVIAGLGEAAAGGAGTVAPASGAGFDE
FVLCRVFRASA*
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