prot_H-canaliculatus_F_contig1368.2955.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1368.2955.1
Unique Nameprot_H-canaliculatus_F_contig1368.2955.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length256
Homology
BLAST of mRNA_H-canaliculatus_F_contig1368.2955.1 vs. uniprot
Match: A0A6H5KSG2_9PHAE (Nucleolar protein 16 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG2_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 3.170e-88
Identity = 146/191 (76.44%), Postives = 161/191 (84.29%), Query Frame = 0
Query:    1 MAKNAAKKRRSGRRTVTKKLKNTFRYKKPDIGCAAVRELWDNELTAEANMAKMGLRQSSNRDIRPRANRAAAAATPGGRLVEACEVSRLFDVTDTADLKVIDRNYGRRPMSDEDQRYTAKLMAKHGLNQEAMAGDIKVNYNQLTLGQLRRMCDTFLSLGDDQRVVAVPER--------ASKGAADGPASAT 183
            MAKNAAKKRRSG R V+KKLKNTFRYKKPDI  A VRE WD+ LTAE NMAKMGLRQS+NRDIR  A RAAA+A PGG++VE+CEVSRLFDV DTADLKVIDRNYGRRPMSDEDQRY AKL++KHGL+ EAMA DIKVNYNQLTLGQLRRMCDT LSL ++QRVV +PER        AS+ AA G A+AT
Sbjct:    1 MAKNAAKKRRSGTRKVSKKLKNTFRYKKPDISSAVVRERWDSNLTAETNMAKMGLRQSANRDIRAPARRAAASAAPGGKIVESCEVSRLFDVADTADLKVIDRNYGRRPMSDEDQRYMAKLLSKHGLDHEAMARDIKVNYNQLTLGQLRRMCDTLLSLDEEQRVVTLPERVANEAAKAASRTAAGGAAAAT 191          
BLAST of mRNA_H-canaliculatus_F_contig1368.2955.1 vs. uniprot
Match: D8LSG8_ECTSI (Nucleolar protein 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG8_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 6.730e-61
Identity = 111/167 (66.47%), Postives = 129/167 (77.25%), Query Frame = 0
Query:   50 MAKMGLRQSSNRDIRPRANRAAAAATPGGRLVEACEVSRLFDVTDTADLKVIDRNYGRRPMSDEDQRYTAKLMAKHGLNQEAMAGDIKVNYNQLTLGQLRRMCDTFLSLGDDQRVVAVPERASKGAADGPASATADRGVGGKGSLGNGSKQKSAEQPPPMAIDTGEE 216
            MAKMGLRQS+NRDIR  A RAAA+A PGG++VE+CEVSRLFDV DTADLKVIDRNYGRRPMSDEDQRY AKL+ KHGL+ EAM  DIKVNYNQLTLGQLRRMCDT LSLG++QRVV +PER +  A    ++  A     G G+    S + SA  P  +A++ GEE
Sbjct:    1 MAKMGLRQSANRDIRAPARRAAASAAPGGKIVESCEVSRLFDVADTADLKVIDRNYGRRPMSDEDQRYMAKLLTKHGLDHEAMTRDIKVNYNQLTLGQLRRMCDTLLSLGEEQRVVTLPERVANEATKAASTTAAGGTAAGTGTGPCHSGRVSASTP--VAMEVGEE 165          
BLAST of mRNA_H-canaliculatus_F_contig1368.2955.1 vs. uniprot
Match: A0A7R9UCV7_9STRA (Nucleolar protein 16 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCV7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.650e-17
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 0
Query:    6 AKKRRSGRRTVTKKLKNTFRYKKPDIGCAAVRELWDNELTAEANMAKMGLRQSSNRDIRPRANRAAAAATPGGRLVEACEVSRLFDVTDTADLKVIDRNYGRRPMSDEDQRYTAKLMAKHGLNQEAMAGDIKVNYNQLTLGQLRRMCDTFLSLGDDQRVVAVPERASK 173
            +KKRRSGR+ V++K K      +P +   +++++WD +L    N+ ++GL  + N +   ++ +       G +LV        F     +D   +DRN  RRPMS+EDQRY AK M KHG + +AM  DI  N  Q T  +LR+M   FL L   QR++ VP   ++
Sbjct:   11 SKKRRSGRQRVSRKNKIV----RPVVTDRSLKKVWDEKLPPAENLKRVGLNFNVNGEFGRKSTK------KGPKLVAETLQEVTFAEIPASDSLDVDRNPRRRPMSEEDQRYIAKQMKKHGKDYKAMFMDIDTNVMQYTEAKLRKMASRFLLLEGAQRLIPVPSEVAE 168          
BLAST of mRNA_H-canaliculatus_F_contig1368.2955.1 vs. uniprot
Match: A0A7S1XQN3_9STRA (Nucleolar protein 16 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQN3_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 6.150e-15
Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 0
Query:    7 KKRRSGRRTVTKKLKNTFRYKKPDIGCAAVRELWDNELTAEANMAKMGLRQSSNRDIRPRANRAAAAATPGGRLVEACEVSRLFDVTDTADLKVIDRNYGRRPMSDEDQRYTAKLMAKHGLNQEAMAGDIKVNYNQLTLGQLRRMCDTFLSLGDDQRVVAVP 168
            KKRRSGRR V++  K      K  +    +R++WD +L A  N+ ++GL    N   RP A R+A    P      A EV+   DV  + DL    RN  R+ MS+ DQRY AK +AKHG   + M  D++ N  Q T  QLR+M   FL LG+ +R V VP
Sbjct:   56 KKRRSGRRKVSRGNK----VPKAKVTDHNLRKVWDEKLPAAVNLKRVGLTHDVN-GKRPAARRSAREGKPIAAATLA-EVT-FADVPASDDLDGF-RNPRRKAMSEADQRYIAKQLAKHGTEYKKMFMDVETNVMQYTETQLRKMASRFLLLGEHERDVPVP 209          
BLAST of mRNA_H-canaliculatus_F_contig1368.2955.1 vs. uniprot
Match: A0A7S2VEB0_9STRA (Nucleolar protein 16 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEB0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.220e-6
Identity = 53/169 (31.36%), Postives = 75/169 (44.38%), Query Frame = 0
Query:    8 KRRSGRRTVTKKLKNTFRYKK-----PDIGCAAVRELWDNELTAEANMAKMGLRQSSNRDIRPRANRAAAAATPGGRLVEACEVSRLFDV--TDTADLKVIDRNYGRRPMSDEDQRYTAKLMAKHGLNQEAMAGDIKVNYNQLTLGQLRRMCDTFLSLGDDQRVVAVPE 169
            KRR+GR  + K    T+R  K     P      +++ WD  ++  AN+ KMGL    N     R +      T    +        LFD+  +D   L+       R P+ +E+++Y AK M KHG N   M  D K N  Q T   LR++   +L L   QR V VPE
Sbjct:    9 KRRAGR--IGKVKLKTYRTWKRWDPNPKFTDKRIKKNWDTNISPSANLVKMGLVALPNDLNNSRGSSTKVTVTQSTPI-------ELFDIPESDRPSLR------SRYPLDEEEEKYIAKCMKKHGDNYLKMFRDTKTNDMQHTEQVLRKLGSRYLLLSPQQRRVEVPE 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1368.2955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KSG2_9PHAE3.170e-8876.44Nucleolar protein 16 n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LSG8_ECTSI6.730e-6166.47Nucleolar protein 16 n=1 Tax=Ectocarpus siliculosu... [more]
A0A7R9UCV7_9STRA1.650e-1735.12Nucleolar protein 16 n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XQN3_9STRA6.150e-1540.12Nucleolar protein 16 n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2VEB0_9STRA2.220e-631.36Nucleolar protein 16 n=1 Tax=Amphiprora paludosa T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 227..249
IPR019002Ribosome biogenesis protein Nop16PFAMPF09420Nop16coord: 7..62
e-value: 2.7E-6
score: 27.6
coord: 106..154
e-value: 3.9E-9
score: 36.8
IPR019002Ribosome biogenesis protein Nop16PANTHERPTHR13243HSPC111 PROTEIN-RELATEDcoord: 5..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1368contigH-canaliculatus_F_contig1368:7757..12201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1368.2955.1mRNA_H-canaliculatus_F_contig1368.2955.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1368 7757..12201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1368.2955.1 ID=prot_H-canaliculatus_F_contig1368.2955.1|Name=mRNA_H-canaliculatus_F_contig1368.2955.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=256bp
MAKNAAKKRRSGRRTVTKKLKNTFRYKKPDIGCAAVRELWDNELTAEANM
AKMGLRQSSNRDIRPRANRAAAAATPGGRLVEACEVSRLFDVTDTADLKV
IDRNYGRRPMSDEDQRYTAKLMAKHGLNQEAMAGDIKVNYNQLTLGQLRR
MCDTFLSLGDDQRVVAVPERASKGAADGPASATADRGVGGKGSLGNGSKQ
KSAEQPPPMAIDTGEEGEGEEAADGTVMREEKEVEKNTKKKKKKKKKKKS
SSSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019002Ribosome_biogenesis_Nop16