prot_H-canaliculatus_F_contig13605.2908.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13605.2908.1
Unique Nameprot_H-canaliculatus_F_contig13605.2908.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length173
Homology
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: A0A6H5KRY8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRY8_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.420e-66
Identity = 119/177 (67.23%), Postives = 133/177 (75.14%), Query Frame = 0
Query:    2 APAAXXXXXXXXXAPAHYRLDLDRVAKLRAHQILRAHEEDMAGGGN------NSHHGPSEDGPLTLDDFMERWAASMPGVDTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISEGDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            APAA         APA+ RLDL +VA+LRAHQILRAHE +M GG         S HG    GP++L +FM++WAASMPGVDTPSQDLLKGIAL+E +   D  GK   +S V+YVPASGLP +PAERLAALFRIKPKWPM ELEPYISE DRKAGFLLKNTR STDP TGQKLFS R
Sbjct:  302 APAAADSVADQTVAPAYLRLDLAKVARLRAHQILRAHEAEMNGGXXXXXXXXGSLHGSG--GPISLGEFMDQWAASMPGVDTPSQDLLKGIALVETR---DSKGKDKNASLVSYVPASGLPFSPAERLAALFRIKPKWPMAELEPYISEADRKAGFLLKNTRASTDPGTGQKLFSTR 473          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: B4FIU9_MAIZE (Zinc ion binding n=2 Tax=Zea mays TaxID=4577 RepID=B4FIU9_MAIZE)

HSP 1 Score: 74.3 bits (181), Expect = 1.940e-12
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 0
Query:   57 GPLTLDDFMERWAASMP-GVDTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISE----GDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            G + L +FME+W  S+P G+  P   +L+G  L EK G         A + V     + LPLAPAER AALFR + KW   +L+PYI +    G    G L+K TR S   A  + +F+AR
Sbjct:  292 GKMKLSNFMEKWKRSIPSGMCCPDLQMLEGEVLCEKLG---------AETWVHAFSVTDLPLAPAERFAALFRERAKWEWKDLQPYIRDLHVPGASSEGLLIKYTRRSQPNAEAEPIFTAR 403          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: A0A3L6FR04_MAIZE (Sister chromatid cohesion protein DCC1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6FR04_MAIZE)

HSP 1 Score: 74.3 bits (181), Expect = 2.470e-12
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 0
Query:   57 GPLTLDDFMERWAASMP-GVDTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISE----GDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            G + L +FME+W  S+P G+  P   +L+G  L EK G         A + V     + LPLAPAER AALFR + KW   +L+PYI +    G    G L+K TR S   A  + +F+AR
Sbjct:  632 GKMKLSNFMEKWKRSIPSGMCCPDLQMLEGEVLCEKLG---------AETWVHAFSVTDLPLAPAERFAALFRERAKWEWKDLQPYIRDLHVPGASSEGLLIKYTRRSQPNAEAEPIFTAR 743          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: J3M3G3_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3M3G3_ORYBR)

HSP 1 Score: 72.0 bits (175), Expect = 8.600e-12
Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 0
Query:   57 GPLTLDDFMERWAASMPGVDTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISE----GDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            G + L++FM++W  S+P        +L+G  L EK         + A + V     S LPLAPA+R AALFR +P+W   +L+PYI +    G    G L+K TR +   A  + +F+AR
Sbjct:  208 GKMKLENFMDKWVRSIPSGMHVDLQMLQGEVLCEK---------IGAETWVHTFSVSDLPLAPADRFAALFRERPRWEWKDLQPYIRDLRVPGVSSEGLLIKYTRRTQPSADAEPIFTAR 318          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: A0A7R9Y8B8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y8B8_MICPS)

HSP 1 Score: 67.8 bits (164), Expect = 2.050e-11
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   61 LDDFMERWAASMPGV--DTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISEGDRKAGF---LLKNTRFSTDPATGQKLFSAR 172
            L DF+ERW  S+P    D     LL+G+AL++K  G D +     ++ V    A  LP  P ER  ALF +KP+W M ELEPY+  G R+      LLK TR S   A    ++S R
Sbjct:   20 LRDFVERWRESVPEELRDVVDASLLRGLALVDKTAGVDGS----ENAFVRPFRADRLPKTPKERFHALFTLKPRWTMDELEPYVV-GTREMTVEAQLLKFTRVSQPTADAMPVYSKR 131          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: C5WT05_SORBI (Uncharacterized protein n=11 Tax=Panicoideae TaxID=147369 RepID=C5WT05_SORBI)

HSP 1 Score: 70.5 bits (171), Expect = 4.320e-11
Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 0
Query:   57 GPLTLDDFMERWAASMPGVDTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISE----GDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            G + L +FM++W  S+P        +L+G  L EK G         A + V     + LPLAPA+R AALFR +PKW   +L+PYI +    G    G L+K TR +   A  + +F+AR
Sbjct:  290 GKMKLANFMDKWERSIPSGMHADLQMLEGEVLCEKLG---------AETWVHAFSVADLPLAPADRFAALFRERPKWEWKDLQPYIRDLRLPGVSSEGLLIKYTRRTQPSAEAEPIFTAR 400          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: A0A0P0WH84_ORYSJ (Os05g0119600 protein n=11 Tax=Oryzinae TaxID=1648021 RepID=A0A0P0WH84_ORYSJ)

HSP 1 Score: 69.3 bits (168), Expect = 1.110e-10
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 0
Query:   57 GPLTLDDFMERWAASMPGVDTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISE----GDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            G + L++FM +W  S+P        +L+G  L EK G         A + V     + LPLAPA+R AALF+ +PKW   +L+PYI +    G    G L+K TR +   A  + +F+AR
Sbjct:  297 GKMKLENFMGKWERSIPSGMRADLQMLEGEVLCEKLG---------AETWVHAFSVADLPLAPADRFAALFQERPKWEWKDLQPYIRDLRVPGVSSEGLLIKYTRKTQPSADAEPIFTAR 407          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: C1N731_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N731_MICPC)

HSP 1 Score: 67.4 bits (163), Expect = 5.750e-10
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   61 LDDFMERWAASMPGV--DTPSQDLLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISEGDRKAGF---LLKNTRFSTDPATGQKLFSAR 172
            L DF+ERW  S+P    D     LL+G+AL++K  G D +     ++ V    A  LP  P ER  ALF +KP+W M ELEPY+  G R+      LLK TR S   A    ++S R
Sbjct:  403 LRDFVERWRESVPEELRDVVDASLLRGLALVDKTAGVDGS----ENAFVRPFRADRLPKTPKERFHALFTLKPRWTMDELEPYVV-GTREMTVEAQLLKFTRVSQPTADATPVYSKR 514          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: I0Z8H1_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z8H1_COCSC)

HSP 1 Score: 58.9 bits (141), Expect = 1.970e-8
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   82 LLKGIALLEKKGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISE---GDRKAGFLLKN-TRFSTDPATGQKLFSAR 172
            +L+G AL E+ GG+D          + ++PA+ +P  PA R AALF +KP+W + +LEPY+++     R A FLL    R S D  +   ++SAR
Sbjct:    7 MLRGEALREEIGGEDM---------LRHLPAAAMPTDPAARFAALFAVKPRWELPDLEPYLADLQVPGRSAEFLLLTYARASQDSPSAPLVYSAR 92          
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Match: C1EF92_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EF92_MICCC)

HSP 1 Score: 61.6 bits (148), Expect = 5.620e-8
Identity = 46/163 (28.22%), Postives = 76/163 (46.63%), Query Frame = 0
Query:   15 APAHYRLDLDRVAKLRAHQILRAHEEDMAGGGNNSHHGPSEDGPLTLDDFMERWAASMPGV--DTPSQDLLKGIALLEK-KGGKDQNGKVAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYIS--EGDRKAGFLLKNTRFSTDPATGQKLFSAR 172
            +P  +++D  +V + +A ++L   +   AG              L L +F+  W+           ++DLLKG+AL+EK   G+D++  V     V       LP  P +R  A+F +KP+W M EL+ Y++    +     LLK TR S   A    ++S R
Sbjct:  345 SPCVWKIDAKKVCRAKASRMLEGSKAAAAGR-------------LRLGEFLADWSGRCDEELRSACTRDLLKGLALIEKGASGRDEDALVRVFRDVD------LPKNPRDRFRAIFALKPRWQMDELDAYVAATSDETVEAQLLKYTRVSQPTADAVPIYSKR 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13605.2908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KRY8_9PHAE1.420e-6667.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
B4FIU9_MAIZE1.940e-1239.67Zinc ion binding n=2 Tax=Zea mays TaxID=4577 RepID... [more]
A0A3L6FR04_MAIZE2.470e-1239.67Sister chromatid cohesion protein DCC1 n=1 Tax=Zea... [more]
J3M3G3_ORYBR8.600e-1235.83Uncharacterized protein n=2 Tax=Oryza brachyantha ... [more]
A0A7R9Y8B8_MICPS2.050e-1140.17Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C5WT05_SORBI4.320e-1136.67Uncharacterized protein n=11 Tax=Panicoideae TaxID... [more]
A0A0P0WH84_ORYSJ1.110e-1035.83Os05g0119600 protein n=11 Tax=Oryzinae TaxID=16480... [more]
C1N731_MICPC5.750e-1040.17Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
I0Z8H1_COCSC1.970e-837.89Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
C1EF92_MICCC5.620e-828.22Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019128Sister chromatid cohesion protein Dcc1PFAMPF09724Dcc1coord: 13..142
e-value: 2.8E-26
score: 92.6
IPR019128Sister chromatid cohesion protein Dcc1PANTHERPTHR13395SISTER CHROMATID COHESION PROTEIN DCC1-RELATEDcoord: 18..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13605contigH-canaliculatus_F_contig13605:139..1773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13605.2908.1mRNA_H-canaliculatus_F_contig13605.2908.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13605 139..1773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13605.2908.1 ID=prot_H-canaliculatus_F_contig13605.2908.1|Name=mRNA_H-canaliculatus_F_contig13605.2908.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=173bp
TAPAAAAAAAASAGAPAHYRLDLDRVAKLRAHQILRAHEEDMAGGGNNSH
HGPSEDGPLTLDDFMERWAASMPGVDTPSQDLLKGIALLEKKGGKDQNGK
VAASSSVTYVPASGLPLAPAERLAALFRIKPKWPMGELEPYISEGDRKAG
FLLKNTRFSTDPATGQKLFSAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019128Dcc1