prot_H-canaliculatus_F_contig13595.2901.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13595.2901.1
Unique Nameprot_H-canaliculatus_F_contig13595.2901.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length293
Homology
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: D8LKW8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW8_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.870e-89
Identity = 136/144 (94.44%), Postives = 140/144 (97.22%), Query Frame = 0
Query:   31 MRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDH 174
            MRAQAPRRCVDIAGSIMHHIINRA+VPTAGGDPP+GTGGL WSVQPHSSY RRM+PPA IASNPA+GICTQWVKTS NKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDH
Sbjct:    1 MRAQAPRRCVDIAGSIMHHIINRAYVPTAGGDPPIGTGGLAWSVQPHSSYARRMVPPAVIASNPASGICTQWVKTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDH 144          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: A0A836CIR2_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIR2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.280e-41
Identity = 78/136 (57.35%), Postives = 95/136 (69.85%), Query Frame = 0
Query:   34 QAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTL 169
            Q  RR VD++  I  H+  RA+    G D      G  W++QPHSSYVRR+LPP A  +N A  +CT WVK S+NKQR PV  L+WAP G TRCITGNSSGEFTLWKDG+FNF  I+QAH +AVR+M WS SG+ +
Sbjct:   12 QGLRRTVDVSNCITLHLCARAYW---GND-----AGEAWALQPHSSYVRRLLPPFASRANAATCLCTHWVKASVNKQRSPVNVLSWAPEGATRCITGNSSGEFTLWKDGAFNFERIMQAHDTAVRAMTWSRSGSNM 139          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: A0A1V9ZCF0_9STRA (WD40 repeat-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCF0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.690e-30
Identity = 70/161 (43.48%), Postives = 92/161 (57.14%), Query Frame = 0
Query:   27 EERRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAG-ICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXKXXXXXMT 186
            +++R R    R+C+D   + +  +  R F       PP       + + PHSSY + MLPPAA A +     +CT++ ++S NKQRCPV CL W P G  R ITGNS GEFTLW   +FNF TILQAH  AVR+M WSH+ N  ++ DH    K     MT
Sbjct:   21 DKQRNRKPIVRKCIDPNSTFISFVTQRKFARDFRDLPPQ------FHMNPHSSYKKYMLPPAAFARDDLMSCVCTKFCRSSTNKQRCPVNCLMWTPEG-RRLITGNSVGEFTLWNGLAFNFETILQAHDDAVRAMVWSHNDNWFVTADHGGVIKYWQSSMT 174          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: UPI0010FC84E9 (LOW QUALITY PROTEIN: pre-mRNA 3' end processing protein WDR33-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FC84E9)

HSP 1 Score: 129 bits (325), Expect = 5.280e-30
Identity = 69/151 (45.70%), Postives = 90/151 (59.60%), Query Frame = 0
Query:   29 RRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXK 179
            +RMR    R+ VD   S++  I NR +      DP   +G     +QP  S+   + PP  + SNP   + T++V+TS NK RCP+FC+AW P G  R +TG SSGEFTLW   +FNF TILQAH S VR+M WSH+ N L+S DH    K
Sbjct:   48 KRMRKAVMRKTVDYNSSVVKQIENRKWFK----DPSKRSG-----MQPDDSFSSDVFPPGCLLSNPINAVTTKFVRTSTNKLRCPIFCVAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMVWSHADNWLLSSDHGGFIK 188          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: A0A2B4SC26_STYPI (Pre-mRNA 3' end processing protein WDR33 n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SC26_STYPI)

HSP 1 Score: 126 bits (316), Expect = 7.980e-29
Identity = 69/151 (45.70%), Postives = 89/151 (58.94%), Query Frame = 0
Query:   29 RRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXK 179
            +RMR    R+ VD   S++  I NR +      D    +G     +QP  S+   + PPA +  NP   + T++V+TS NK RCP+FC+AW P G  R +TG SSGEFTLW   +FNF TILQAH S VRSM WSH+ N L+S DH    K
Sbjct:   47 KRMRKAVMRKTVDYNSSVVKLIENRKWFK----DLSKRSG-----MQPDDSFSSDVFPPACLVENPINAVTTKFVRTSTNKLRCPIFCVAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHADNWLLSSDHGGFIK 187          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: A0A1J1IDJ2_9DIPT (CLUMA_CG011202, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1IDJ2_9DIPT)

HSP 1 Score: 125 bits (313), Expect = 1.840e-28
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 0
Query:   29 RRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXK 179
            +R+R    R+ VD   SI+  I NR +   +             ++QP ++Y+  ++PP++   NP+  I T++VKT+ NK RCP+F LAW P G  R ITG SSGEFTLW   +FNF TILQAH+ +VR+M WSH+ + +++GDHN   K
Sbjct:   55 KRLRKSVMRKTVDYNSSIIKAIENRVWQRDSRDRR---------ALQPENNYIPDLMPPSSYLDNPSNAITTRFVKTATNKMRCPIFTLAWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAHTVSVRAMIWSHNDSWMVTGDHNGYVK 195          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: B3RZA6_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RZA6_TRIAD)

HSP 1 Score: 122 bits (305), Expect = 3.660e-28
Identity = 64/145 (44.14%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   29 RRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGD 173
            +RMR    RR +D   S++  + +R +      D PV        +QP   Y   +LPP+++  NP   + T++V+TS NKQRCP+FC+ W P G  R ITG SSGEFTLW   +FNF TILQAH ++VRSM WSH+   L++ D
Sbjct:   39 KRMRKAVQRRTIDYNASVIRQLESRVWQSDYR-DQPV--------IQPDPLYFNSLLPPSSMKQNPMNAVTTKFVRTSTNKQRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAHDTSVRSMIWSHNDTWLLTTD 173          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: A0A3R7A8R4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A8R4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.660e-28
Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 0
Query:   72 WSVQPHSSYVRRMLPPAAIASNPAAGI-CTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXKXXXXXMT 186
            +++ PHS+Y R +LPP A   +  A + CT++ ++S NKQRCPV CL W P G  R ITGNS GEFTLW   +FNF TILQAH  AVR+M WSH+ N  ++ DH    K     MT
Sbjct:    6 FAMNPHSAYKRYILPPGAFNRDDLASVVCTKFCRSSTNKQRCPVNCLMWTPEG-RRLITGNSVGEFTLWNGLAFNFETILQAHDDAVRAMVWSHNDNWFVTADHGGVIKYWQSSMT 120          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: A0A336M621_CULSO (CSON012695 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336M621_CULSO)

HSP 1 Score: 123 bits (308), Expect = 8.070e-28
Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 0
Query:   29 RRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXK 179
            +R+R    R+ VD + SI+  I NR +   A             ++QP S Y   ++PP++   N +  + T++VKT+ NKQRCP+F LAW P G  R +TG SSGEFTLW   +FNF TILQAH  +VR+M WSH+   +++GDH    K
Sbjct:   91 KRLRKSVMRKTVDYSASIIKAIENRVWQRDARDQR---------ALQPESIYAPHLMPPSSYLENSSNAVTTRFVKTATNKQRCPIFTLAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDVSVRTMVWSHNDQWMVTGDHGGYVK 231          
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Match: UPI0009E42302 (pre-mRNA 3' end processing protein WDR33-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E42302)

HSP 1 Score: 123 bits (308), Expect = 9.520e-28
Identity = 66/151 (43.71%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   29 RRMRAQAPRRCVDIAGSIMHHIINRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICTQWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAHSSAVRSMAWSHSGNTLISGDHNXXXK 179
            +RMR    R+ VD   S++  I NR +             G+    QP  S+   + PP  +  NP   + T++V+TS NK RCP+FC+AW P G  R +TG SSGEFTLW   +FNF TILQAH   VRSM WSH+ N L+S DH    K
Sbjct:   46 KRMRKAVMRKTVDYNSSVVKQIENRKWFKDL-----TRRSGM----QPDDSFSSDVYPPGCLLDNPINAVTTKFVRTSTNKLRCPIFCVAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAHDGPVRSMVWSHADNWLLSSDHGGFIK 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13595.2901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW8_ECTSI1.870e-8994.44CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CIR2_9STRA2.280e-4157.35WD40-repeat-containing domain protein (Fragment) n... [more]
A0A1V9ZCF0_9STRA1.690e-3043.48WD40 repeat-containing protein n=1 Tax=Thraustothe... [more]
UPI0010FC84E95.280e-3045.70LOW QUALITY PROTEIN: pre-mRNA 3' end processing pr... [more]
A0A2B4SC26_STYPI7.980e-2945.70Pre-mRNA 3' end processing protein WDR33 n=3 Tax=P... [more]
A0A1J1IDJ2_9DIPT1.840e-2843.05CLUMA_CG011202, isoform A n=1 Tax=Clunio marinus T... [more]
B3RZA6_TRIAD3.660e-2844.14Uncharacterized protein n=1 Tax=Trichoplax adhaere... [more]
A0A3R7A8R4_9STRA6.660e-2850.86Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A336M621_CULSO8.070e-2842.38CSON012695 protein n=1 Tax=Culicoides sonorensis T... [more]
UPI0009E423029.520e-2843.71pre-mRNA 3' end processing protein WDR33-like n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 169..183
score: 24.84
coord: 211..225
score: 39.61
coord: 253..267
score: 38.79
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 227..266
e-value: 2.4E-6
score: 37.1
coord: 143..182
e-value: 6.0E-8
score: 42.4
coord: 100..140
e-value: 2.5
score: 14.5
coord: 184..224
e-value: 1.7E-6
score: 37.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 146..181
e-value: 3.8E-5
score: 24.3
coord: 232..266
e-value: 6.2E-7
score: 30.0
coord: 188..224
e-value: 3.8E-7
score: 30.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 192..224
score: 11.01
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 234..275
score: 15.956
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 150..182
score: 13.048
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 80..293
e-value: 7.1E-43
score: 148.7
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 28..289
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 3..13
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 107..293
score: 34.302
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 105..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13595contigH-canaliculatus_F_contig13595:80..3004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13595.2901.1mRNA_H-canaliculatus_F_contig13595.2901.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13595 80..3004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13595.2901.1 ID=prot_H-canaliculatus_F_contig13595.2901.1|Name=mRNA_H-canaliculatus_F_contig13595.2901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=293bp
SPPPPPPPPPPPPVRTQIADRRQWGEEERRMRAQAPRRCVDIAGSIMHHI
INRAFVPTAGGDPPVGTGGLPWSVQPHSSYVRRMLPPAAIASNPAAGICT
QWVKTSINKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTIL
QAHSSAVRSMAWSHSGNTLISGDHNGNIKYWQPSMTAVQHFIAHGANPIR
GLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPYK
SLIVSGSKDNLIKLWDPRTGNSLSTLYGHKNTVMKVHPHEGTW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep