prot_H-canaliculatus_F_contig1358.2891.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1358.2891.1
Unique Nameprot_H-canaliculatus_F_contig1358.2891.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length711
Homology
BLAST of mRNA_H-canaliculatus_F_contig1358.2891.1 vs. uniprot
Match: D8LJR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR9_ECTSI)

HSP 1 Score: 615 bits (1586), Expect = 1.930e-211
Identity = 353/527 (66.98%), Postives = 385/527 (73.06%), Query Frame = 0
Query:  205 SYFSGDAVQAVLDAVDSYATSAKKTLEADELAVSQGRPLQGKYIVLDSGNELANRLRGVLSGFFLGALTDRVFVADITYQKDVTDGLLSALFEGPGYEWDLSKLSPQLRRALAPKAAFP--GKVRGRTNGGGGGTILHFDMSEEHFQRWACEDVVK-QASPSSG-VPA-SVVTLSTVVYPLPLLARNSCYASHPLVLAATAAVAGEGTAPQHALGGAGGGRVGQPPADGDDEEGVMRQRGLEVLETLLTRIVLRPKRELRERARKLAGVVRERAEKWAAERDSRGLGRWGSPAQRTPVRVVGLHVRTHFVRAVSDDT-LERNLQHFEHCAVAGRGGASREDAAAVTFYFVATDEVNTQAAASKVWGDGCYFAPFDLPGSKLEGIKAAVVDLLVMGSFDDYVMTPHSSFSELGATLSHTWLPDPRAALRTLPNRPIVPLFPQMNEFERRKAFSLLDRRAVEIVPPP-------AGG--------GLCMRSHVAGMSVAVARGRELLSMFEAIEDAPCMKGKGDSIAAL 710
            S+ S  AV+AV+ AV+SYA  AK+TLEADE+AV QGRPLQGKYIVLDSGNEL NRLRGV+SGFFLG LTDRVFVADITYQKD T GLLSALFEGPGYEWDLSKLSP LR ALAP    P  GK+RG  +G      L FDMS+EHF+ W C DVV+ + SP  G  PA +VVTLSTVVYPLPLLARN  YASHP+  AA A                GGG  GQ    G     V+ QRG+E LETLLTR+VLRP RELRERAR LA  VRERA +W            G      PVR+VGLHVRT+FV+A+S  T LERNLQHF+ CAVAG G  +  D  + TFYFVATDE NTQAAA KVWGDGCYF PF LPGSKLEGIKAA VDLLVMGSFDDYVMTPHSSFSELGATLSHTWLPDP  ALRT PNRPIVPLFPQ N+FERRK FSLLDRRAVEI P         AGG        G+CMR+H AGMSV VA GR+LLSMFEA+E APCMKGK  +IA L
Sbjct:  106 SFLSEGAVEAVVGAVESYADFAKRTLEADEVAVQQGRPLQGKYIVLDSGNELVNRLRGVMSGFFLGVLTDRVFVADITYQKDGTQGLLSALFEGPGYEWDLSKLSPGLRGALAPNKKKPPRGKIRGGASGSD--ATLLFDMSKEHFEHWVCHDVVEGRGSPGQGGSPAGAVVTLSTVVYPLPLLARNPAYASHPIFQAAAA----------------GGGAEGQKNPGGT----VVGQRGVEALETLLTRVVLRPTRELRERARGLADRVRERANEWG-----------GXXXXGRPVRIVGLHVRTYFVKAISTATKLERNLQHFDDCAVAGSGDGA--DTGSSTFYFVATDEANTQAAAKKVWGDGCYFEPFTLPGSKLEGIKAAFVDLLVMGSFDDYVMTPHSSFSELGATLSHTWLPDPETALRTPPNRPIVPLFPQTNDFERRKVFSLLDRRAVEIFPSDDGQVVAAAGGAGXXSSGKGMCMRAHAAGMSVTVAIGRQLLSMFEAMEGAPCMKGKDTTIADL 597          
BLAST of mRNA_H-canaliculatus_F_contig1358.2891.1 vs. uniprot
Match: A0A6H5L5F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5F2_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 3.680e-153
Identity = 270/428 (63.08%), Postives = 294/428 (68.69%), Query Frame = 0
Query:  303 WDLSKLSPQLRRALAPKAAFP--GKVRGRTNGGGGGTILHFDMSEEHFQRWACEDVVK-QASPSSG-VPA-SVVTLSTVVYPLPLLARNSCYASHPLVLAATAAVAGEGTAPQHALGGAGGGRVGQPPADGDDEEGVMRQRGLEVLETLLTRIVLRPKRELRERARKLAGVVRERAEKWAAERDSRGLGRWGSPAQRTPVRVVGLHVRTHFVRAVSDDTLERNLQHFEHCAVAGRGGASREDAAAVTFYFVATDEVNTQAAASKVWGDGCYFAPFDLPGSKLEGIKAAVVDLLVMGSFDDYVMTPHSSFSELGATLSHTWLPDPRAALRTLPNRPIVPLFPQMNEFERRKAFSLLDRRAVEIVPPP-------AGG--------GLCMRSHVAGMSVAVARGRELLSMFEAIEDAPCMKGKGDSIAAL 710
            WDLSKLSP LR ALAP    P  GK+RG  +G      L FDMS+EHF+ W C DVV+ + SP  G  PA +VVTLSTVVYPLPLLARN  YASHP+  AA A    E               V + P        V+ QRG+E LETLLTR+VLRP RELRERAR LA  VRERA+KW  E    G           PVR+VGLHVRT+FV+A+S  TLER+LQHF+ CAVAG            TFYFVATDE NTQAAA KVW DGCYF PF LPGSKLEGIKAA VDLLVMGSFDDYVMTPHSSFSELGATLSHTWLPDP AALRT PNRPIVPLFPQ NEFERRK FSLLDRRAVEI P         AGG        G+CMR+H AGMSV VA GR+LLSMFEAIE APCMKGK  ++A L
Sbjct:    4 WDLSKLSPGLRGALAPNKKKPPRGKIRGGRSGSD--ATLLFDMSKEHFEHWVCHDVVEGRGSPGQGGSPAVAVVTLSTVVYPLPLLARNPAYASHPIFQAAAAGWTAE---------------VEKNPGGA-----VVGQRGVEALETLLTRVVLRPTRELRERARGLADRVRERAKKWGGEGGKGG-----------PVRIVGLHVRTYFVKAISTATLERDLQHFDDCAVAGSXXXXXXXXXXSTFYFVATDEANTQAAAKKVWEDGCYFEPFTLPGSKLEGIKAAFVDLLVMGSFDDYVMTPHSSFSELGATLSHTWLPDPEAALRTPPNRPIVPLFPQTNEFERRKVFSLLDRRAVEIFPSDGGEVVAAAGGAGAGSSGRGMCMRAHAAGMSVTVAIGRQLLSMFEAIEGAPCMKGKETTVADL 398          
BLAST of mRNA_H-canaliculatus_F_contig1358.2891.1 vs. uniprot
Match: A0A6H5KKD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.080e-38
Identity = 79/98 (80.61%), Postives = 85/98 (86.73%), Query Frame = 0
Query:  205 SYFSGDAVQAVLDAVDSYATSAKKTLEADELAVSQGRPLQGKYIVLDSGNELANRLRGVLSGFFLGALTDRVFVADITYQKDVTDGLLSALFEGPGYE 302
            S+ S  AV+AV+  V+SYA  A+ TLEADELAV QGRPLQGKYIVLDSGNEL NRLRGV+SGFFLG LTDRVFVADITYQKD T GLLSALFEGPGYE
Sbjct:  106 SFLSEGAVKAVVGTVESYADFARGTLEADELAVQQGRPLQGKYIVLDSGNELVNRLRGVMSGFFLGMLTDRVFVADITYQKDGTQGLLSALFEGPGYE 203          
BLAST of mRNA_H-canaliculatus_F_contig1358.2891.1 vs. uniprot
Match: X6MJI9_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MJI9_RETFI)

HSP 1 Score: 66.6 bits (161), Expect = 1.670e-8
Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:  515 DTLERNLQHFEHCAVAGRGGASREDAAAVTFYFVATDEVNTQAAASKVWGDG-CYFAPFDLPGSKLEGIKAAVVDLLVMGSFDDYVMTPHSSFSELGATL 613
            + L    + F HC   G     R+      F + A D    Q+ A  V+G    YF PF L GS L+GI  AVVDL+ + SFD ++ TPHSS+SE+ + L
Sbjct:   12 EALRAEYEWFAHC---GNQVVPRKYRNKPLFIYFAADTAKAQSFAESVFGKHRVYFRPFVLKGSTLQGIIDAVVDLVTVSSFDTFISTPHSSYSEMSSLL 108          
BLAST of mRNA_H-canaliculatus_F_contig1358.2891.1 vs. uniprot
Match: X6NG83_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NG83_RETFI)

HSP 1 Score: 60.8 bits (146), Expect = 1.030e-6
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 0
Query:  545 FYFVATDEVNTQAAASKVWG-DGCYFAPFDLPGSKLEGIKAAVVDLLVMGSFDDYVMTPHSSFSELGATL 613
            F F A D    Q  A++V+G D   + PF L G+ L+GI  AVVDL+ + SFD ++ TPHSS+SE+ + L
Sbjct:    7 FIFFAGDTAQAQEFATQVFGKDRVSYRPFLLKGNSLQGIIDAVVDLVTVSSFDAFISTPHSSYSEMSSLL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1358.2891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJR9_ECTSI1.930e-21166.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5F2_9PHAE3.680e-15363.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKD8_9PHAE1.080e-3880.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
X6MJI9_RETFI1.670e-839.00Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
X6NG83_RETFI1.030e-645.71Uncharacterized protein (Fragment) n=1 Tax=Reticul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..710
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1358contigH-canaliculatus_F_contig1358:10517..18091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1358.2891.1mRNA_H-canaliculatus_F_contig1358.2891.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1358 10459..18830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1358.2891.1 ID=prot_H-canaliculatus_F_contig1358.2891.1|Name=mRNA_H-canaliculatus_F_contig1358.2891.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=711bp
MSFRSRLPSMRDGHSKGRAHARSSSRTSGDHPARRSGRPSILRPLLAGMV
FTSAILYFCGWDSTSREGKTAPPLPVSDGRSSGGSLAGRGKTSRRTAADL
ADLAIGGHPRVSRTKEGEDREASKKRHEDPQASERPESAETVIAPAAAAQ
RPMSGVSGGGGGGGGGGKSLQQRWWNGAGEGDGTSASSGSAAAAAAAAAA
AASFSYFSGDAVQAVLDAVDSYATSAKKTLEADELAVSQGRPLQGKYIVL
DSGNELANRLRGVLSGFFLGALTDRVFVADITYQKDVTDGLLSALFEGPG
YEWDLSKLSPQLRRALAPKAAFPGKVRGRTNGGGGGTILHFDMSEEHFQR
WACEDVVKQASPSSGVPASVVTLSTVVYPLPLLARNSCYASHPLVLAATA
AVAGEGTAPQHALGGAGGGRVGQPPADGDDEEGVMRQRGLEVLETLLTRI
VLRPKRELRERARKLAGVVRERAEKWAAERDSRGLGRWGSPAQRTPVRVV
GLHVRTHFVRAVSDDTLERNLQHFEHCAVAGRGGASREDAAAVTFYFVAT
DEVNTQAAASKVWGDGCYFAPFDLPGSKLEGIKAAVVDLLVMGSFDDYVM
TPHSSFSELGATLSHTWLPDPRAALRTLPNRPIVPLFPQMNEFERRKAFS
LLDRRAVEIVPPPAGGGLCMRSHVAGMSVAVARGRELLSMFEAIEDAPCM
KGKGDSIAAL*
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