prot_H-canaliculatus_F_contig13577.2890.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13577.2890.1
Unique Nameprot_H-canaliculatus_F_contig13577.2890.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length102
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13577.2890.1 vs. uniprot
Match: A0A6H5KG18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG18_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.150e-5
Identity = 28/57 (49.12%), Postives = 32/57 (56.14%), Query Frame = 0 
Query:   45 RKHFSEARVKEMAGLKAGGRKEFRIVHVPTELQQADFLMKPLHIGPFYMHRQFAMNL 101
            R HF   RV          R EF++V VP+ LQ ADFL KPLH   F +HR F MNL
Sbjct:  367 RHHFIRERV---------DRGEFKVVFVPSHLQHADFLTKPLHKEAFSVHRNFVMNL 414
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BLAST of mRNA_H-canaliculatus_F_contig13577.2890.1 vs. uniprot
Match: A0A6H5L610_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L610_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 6.840e-5
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 0 
Query:   45 RKHFSEARVKEMAGLKAGGRKEFRIVHVPTELQQADFLMKPLHIGPFYMHRQFAMNL 101
            R HF   RV          R EF++VHV ++LQ+ADFL KPL    F  HR F MN+
Sbjct:   83 RHHFIRERV---------ARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNI 130
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13577.2890.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 9.860e-5
Identity = 27/57 (47.37%), Postives = 32/57 (56.14%), Query Frame = 0 
Query:   45 RKHFSEARVKEMAGLKAGGRKEFRIVHVPTELQQADFLMKPLHIGPFYMHRQFAMNL 101
            R HF   RV          R EF++V+VP+ LQ ADFL KPL    F +HR F MNL
Sbjct:  298 RHHFIRERV---------DRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13577.2890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KG18_9PHAE1.150e-549.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L610_9PHAE6.840e-545.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Q2_9PHAE9.860e-547.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13577contigH-canaliculatus_F_contig13577:2268..2573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13577.2890.1mRNA_H-canaliculatus_F_contig13577.2890.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13577 2066..2609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13577.2890.1 ID=prot_H-canaliculatus_F_contig13577.2890.1|Name=mRNA_H-canaliculatus_F_contig13577.2890.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=102bp
MLAAEEEMLHETSGAPDYDTLPPNKLVSELPTPKMDAEANVGPYRKHFSE
ARVKEMAGLKAGGRKEFRIVHVPTELQQADFLMKPLHIGPFYMHRQFAMN
L*
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