prot_H-canaliculatus_F_contig13567.2879.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13567.2879.1
Unique Nameprot_H-canaliculatus_F_contig13567.2879.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length383
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13567.2879.1 vs. uniprot
Match: A0A6H5JEK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 4.940e-21
Identity = 148/385 (38.44%), Postives = 168/385 (43.64%), Query Frame = 0 
Query:    3 RRVGGRLSFSSAVGTDDGSSGEGSG----AAAAARHERARVAGRAPTRRRASTPGTITAQQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRTRSPLAGTPMDVDSPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGGPAPFVETAPIMQFGRRPTTRATSRRASGGTGRSSAAAAGEPVKAAGSVARKAVSIGGSGSGRXXXXXXXVXXXXXXXXXDNPPAGQPEADDGEVRLTRAEWQCLQYEETISYAVKHASQLALXXXXXXXXXXXXXXXXXXXXFEEKPGERETMVAALAVVKAAHATSLALAATGXXDAEQRQGNSAAAASRGGVSKTQEPARGGGRAGGSPVRGGG 383
            RRVGGRLSF+SAVGTD+GSSGEG G    AA  A     R + R P     S  G  T   +                   X                                P RTRSPLAGTPMDVDSP  XXXXX                          RRGG APFVET P++    R                                              XXXXXXX XXXXXXXXX           +GE+RLTRAEWQC+QYEET+SYAV+H+ QLAL                      EKPGERET++AALAVVKAAHATS+ALAA G    E  QG++    + G  +K Q   R G    GSP+RGGG
Sbjct:  297 RRVGGRLSFTSAVGTDEGSSGEGCGLGTTAAGRAHASSTRNSMRPPPPSGVSAGGNGTTPASAALTGRGSRLSTGATATTAXETAGAG--------------------------PTRTRSPLAGTPMDVDSPGXXXXXXARRRSREPIDEPTVGPAAAT------RRGGRAPFVETTPVVPQSNRXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGELRLTRAEWQCVQYEETVSYAVRHSGQLALAASAGAAADSPSTAAD-----SEKPGERETIMAALAVVKAAHATSVALAARG----EAEQGDT----TTGWATKLQGSCRDGV---GSPIRGGG 617
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13567.2879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JEK2_9PHAE4.940e-2138.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13567contigH-canaliculatus_F_contig13567:163..1634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13567.2879.1mRNA_H-canaliculatus_F_contig13567.2879.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13567 162..1634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13567.2879.1 ID=prot_H-canaliculatus_F_contig13567.2879.1|Name=mRNA_H-canaliculatus_F_contig13567.2879.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=383bp
GGRRVGGRLSFSSAVGTDDGSSGEGSGAAAAARHERARVAGRAPTRRRAS
TPGTITAQQARQQASSTRNAMRPPPPAGTTPASAALTGRASRSSTAAAAG
GAGGAGEAAAGGPRRTRSPLAGTPMDVDSPAGGGGGESVMSTRRRSRESR
DAPTPAAGAGGGGRRGGPAPFVETAPIMQFGRRPTTRATSRRASGGTGRS
SAAAAGEPVKAAGSVARKAVSIGGSGSGRGGGGGAGVGGAGVGGAGDNPP
AGQPEADDGEVRLTRAEWQCLQYEETISYAVKHASQLALAAASSSSSSSS
SAPAPATATFEEKPGERETMVAALAVVKAAHATSLALAATGGGDAEQRQG
NSAAAASRGGVSKTQEPARGGGRAGGSPVRGGG
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