prot_H-canaliculatus_F_contig1353.2862.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1353.2862.1
Unique Name	prot_H-canaliculatus_F_contig1353.2862.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	57

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1353.2862.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 9.190e-8
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0

Query:    6 DTGSATARQWANALGASFLISLCSFVGIATVVSNRITRKINLSLALLFASGA 57
            +TG+ATA +W NAL AS ++S CSF GI  V S  +   I+LS A +FASGA
Sbjct:  174 ETGTATAGKWGNALVASLVVSACSFAGIVVVASKHVANNIDLSHAFVFASGA 225

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1353.2862.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.110e-6
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0

Query:    9 SATARQWANALGASFLISLCSFVGIATVVSNRITRKINLSLALLFASGA 57
            SATA QW NA+ A+ ++SLCSF GI T+++ ++   I LS    FASGA
Sbjct:   58 SATAAQWGNAILATVIVSLCSFTGILTIINQKVANAIGLSHTFTFASGA 106

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1353.2862.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1353.2862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FLW4_ECTSI	9.190e-8	53.85	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LNP7_ECTSI	1.110e-6	51.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..57
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 15..37

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1353	contig	H-canaliculatus_F_contig1353:12660..13255 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1353.2862.1	mRNA_H-canaliculatus_F_contig1353.2862.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1353 12660..13256 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1353.2862.1 ID=prot_H-canaliculatus_F_contig1353.2862.1|Name=mRNA_H-canaliculatus_F_contig1353.2862.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=57bp
DERDEDTGSATARQWANALGASFLISLCSFVGIATVVSNRITRKINLSLA
LLFASGA