prot_H-canaliculatus_F_contig13501.2842.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13501.2842.1
Unique Nameprot_H-canaliculatus_F_contig13501.2842.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length65
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13501.2842.1 vs. uniprot
Match: D7G914_ECTSI (ER membrane protein complex subunit 10 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G914_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 2.060e-5
Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:    1 MKTCMITAVALLTWFAYGSARSVSVEHAFGSNSKFSHRGSAEIVVDPAGAVPPSATVQPVKLH 63
            MK+          W    SARS+SVEHAFG  ++++HRG  E+ +DP+ A   SA++QP  L 
Sbjct:    1 MKSLKTATSVAFAWCVQASARSLSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATLR 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13501.2842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G914_ECTSI2.060e-541.27ER membrane protein complex subunit 10 n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..65
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13501contigH-canaliculatus_F_contig13501:1181..1613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13501.2842.1mRNA_H-canaliculatus_F_contig13501.2842.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13501 1181..1617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13501.2842.1 ID=prot_H-canaliculatus_F_contig13501.2842.1|Name=mRNA_H-canaliculatus_F_contig13501.2842.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=65bp
MKTCMITAVALLTWFAYGSARSVSVEHAFGSNSKFSHRGSAEIVVDPAGA
VPPSATVQPVKLHYS
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