prot_H-canaliculatus_F_contig1347.2820.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1347.2820.1
Unique Nameprot_H-canaliculatus_F_contig1347.2820.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length764
Homology
BLAST of mRNA_H-canaliculatus_F_contig1347.2820.1 vs. uniprot
Match: D8LC61_ECTSI (Putative copper transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC61_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 1.030e-87
Identity = 301/774 (38.89%), Postives = 361/774 (46.64%), Query Frame = 0
Query:    6 SGADVLCIKHGGGKRCMVPGCQKLVRKNNRCTKHASEGSGNADTPRATSVXXXXXXXXXXXXXXXXXXXXXXXXXXXTTRTSPAAAPPVPRRRAESSSRIEPVDHSSSSTVQ-APRAPPERRETSASTGRPSHHEAFRGSSTQQSKSPALLPQPVAEGDNGRGGYAGGGPSAVMSSIACPPPSSYFAPHADFSFRGGSLSAFNPPLAAFGSRVAPAVPAAVAEPLSQ-DGTARGTFGGVRDDVMSSSSGCSPPPPSAGDQVPRYRGRLPGIDSLRSLSLDKQNAPSEASPLARSMDPIQSPNYSAAAHLLSLGGSMPRDRDVPPGNIAPTAGIGRTDGLSDSLALPGRGSGGSSPAQRPRAPCPSPL-----------YRGTRFSNGTLERSPSLSPLPPSPLLQPTXXXXXXXXXXXHLPLPTVGDPQSAN---------GGSR-------------------RVSSDPPGASSRAERGSIPVIPPARPSAAVASDRAXXXXXXXXXXXPXXXVXXXXXXXXXXXXXASDGRNGPGAEKDPRTSIKSPSQGGDCRVSSEAAVAVEATARSPEEVPPTPATRPTQKGPSCCGGKQSAAVHYTATPPANG-------NSSSSARSCSTSPPLEQTSSFISLSVSGMRCMENCGQTVQRALQAVPGVVSVTIHFPTRTASVNVDPGANVSLGDLTSALDAIGFVSTFVASTTTKEPALGQDGVNAVWAIANALGLVDPGCAMAWGAPCSCGDDCQCVNCPQHMKKVSHAVDLVLQA 731
            SGADVL               +KLVRKNNRCTKHAS+GS  A  P   +      XXXXX                   +  PAA     +R A SS+R +   +SS  T Q AP  PP +R   A+  RP        S  ++ +SP L P   A  ++G GG+A GGP   MS +A   PS  F    D    GG LSA   P A     V  AV AA A PL Q     RG  G  +D +       SP    +    PR   +L G+ S+              +  A SM P + P+++ A    S+GG     RD+ PG +    G  R D ++ S            P++R   P P+P            +RG  FS G +ERSPS+SPLPPS LLQP XXX          P    G  ++           GGSR                   RV  + P A      G  P    A PSAA  SD                                      P A      +       G    S +AA+    ++R  E + P PA                                     +    R+CSTSPP EQTSSFISLSVSGM CMENCGQTVQ+AL+ VPGV+SVTIHFPTRTAS+ VD  ANV+LGDLTSALDAIGF S+ VA+TTT+EP L QDGVNAVWAIANALGLVDPGCAMAWG PCSCGDDC+C+NCPQHMKKVSHAVDLVLQA
Sbjct:  127 SGADVLXXXXXXXXXXXXXXXKKLVRKNNRCTKHASDGSSGARAPPRPAASASLAXXXXXTKAAISATTAALTEAVGVPQVPPAARH---QRAAASSARPKSQVYSSCPTKQRAP--PPSQRVAKATPDRPP-------SPRERHQSPPLRPHRRAGAESG-GGFAAGGPLPSMSLMAAREPSPSFGLGGDVPPPGG-LSALREPGA-----VPSAVAAAAAGPLLQGQQQLRGAVGRFQDGIPRGREVFSPD--GSHPHHPRGMPQLAGMGSIGPGLPRFDGRDDSRAAQAASMGP-ELPHHAYA----SVGGQG-LVRDLLPG-VTVANGSERVDMVNGSWM----------PSERMVGPAPAPQGLDGVDNRAPPFRGGHFSKGAIERSPSVSPLPPSLLLQPXXXXFSMP-----FPASATGSREACGXXXXXKVVEGGSRDAAGMNGRQSATYGGGDSDRVPLNAPNAPVWERGGLAPTTTLAHPSAARTSD--------------------------------------PQAAASTSAATAFSMSNGGLPTSQDAAL----SSRPVEPIRPLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKAPERTRACSTSPPAEQTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDAKANVTLGDLTSALDAIGFGSSCVATTTTQEPTLEQDGVNAVWAIANALGLVDPGCAMAWGRPCSCGDDCRCINCPQHMKKVSHAVDLVLQA 815          
BLAST of mRNA_H-canaliculatus_F_contig1347.2820.1 vs. uniprot
Match: A0A6H5KKC5_9PHAE (HMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC5_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 4.130e-53
Identity = 249/730 (34.11%), Postives = 316/730 (43.29%), Query Frame = 0
Query:    6 SGADVLCIKHGGGKRCMVPGCQKLVRKNNRCTKHASEGSGNADTPRATSVXXXXXXXXXXXXXXXXXXXXXXXXXXXTTRTSPAAAPPVPRRRAESSSRIEPVDHSSSSTVQAPRAPPE-RRETSASTGRPSHHEAFRGSSTQQSKSPALLPQPVAEGDNGRGGYAGGGPSAVMSSIACPPPSSYFAPHADFSFRGGSLSAFNPPLAAFGSRVAP-AVPAAVAEPLSQ-DGTARGTFGGVRDDVMSSSSGCSPPPPSAGDQVPRYRGRLPGIDSLRSLSLDKQNAPS-EASPLARSMDPIQSPNYSAAAHLLSLGGSMPRDRDVPPGNIAPTAGIGRTDGLSDSLALPGRGSGGSSPAQRPRAPCPSPLYRGTRFSNGTLERSPSLSPLPPSPLLQPTXXXXXXXXXXXHLPLPTVGDPQSANGGSR--------------RVSSDPPGASSRA----------------------ERGSI-PVIPPARPSAAVASDRAXXXXXXXXXXXPXXXVXXXXXXXXXXXXXASDGRNGPGAEKDPRTSIKSPSQGGDCRVSSEAAVAVEATARSPEEVPPTPAT-----RPTQKGPSCCGGKQSAAVHYTATPPANGNSSSSARSCSTSPPLEQTSSFISLSVSGMRCMENCGQTVQRALQAVPGVVSVTIHFPTRTASVNVDPGANVSLGDLTSALDAIGFVSTFVASTTTKEPALGQDGVNAVWAIANALG 689
            SGADVL               +KLVRKNNRCTKHAS+GS  A  P   +     XXXXXX                 T        PP  R +  ++S   P +   S +     APP  +R   A+  RP        S  ++ +SP L P      ++G GG+A GGP   MS +A   PS  F    D    GG LSA   P  A G R  P AV AA A PL Q      G  G   D +        P   SA    P++   +P +  + ++    +     + S  A++      P++ A A +   GG +  DRD+ PG +           +++     G  +G   P++R     P+P  RG++ S G +ERSPS+SPLPPS LLQ                    G  ++  GG R                S D  G + R                       ERG + P +  A PSAA ASD                                        A      ++ S   GG    S +AA+    +AR  E + P PA      R                            +    R+CSTSPP EQTSSFISLSVSGM CMENCGQTVQ+AL+ VPGV+SVTIHFPTRTAS+ VD  ANV+LGDLTSALDAIGF S+ VA+TT +EP L QDGVNAVWAIANALG
Sbjct:  272 SGADVLXXXXXXXXXXXXXXXKKLVRKNNRCTKHASDGSSGARAPPRPAASASLXXXXXXTKAAISATTAAL-----TEAVGVPQVPPAARHQRAAASLAGPKNQVYSPSPTKHTAPPSSQRGARATPDRPP-------SPRERHQSPPLRPHRRVGAESG-GGFAAGGPLPSMSLMAAREPSPSFGLGGDVPPPGG-LSALREP--ACGERAVPSAVAAAAAGPLLQGQQQLHGAVGRAEDGIPR-----GPEVFSADGNHPQHPRGMPQLAGMGAIGPGLRRFDGRDGSRAAQAASMGTEPSHHAYAAV--DGGGL--DRDLLPGVM-----------VANGSERVGMANGSWMPSERMVGQAPAPPCRGSQLSKGAIERSPSVSPLPPSLLLQ------LPPLFSMPFSASATGSREACGGGGRCGGKVVEGXXXXXXXXSRDAAGINGRESATYGGGDSDQVPLNAPNAPAWERGGLAPTMTLAHPSAARASDLQA-------------------------------------AASTSAATVFSSKNGG-LSTSQDAAL----SARLVEPIRPLPAAASAAPRXXXXXXXXXXXXXXXXXXXXXXXXXGDKAPERTRACSTSPPAEQTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDTEANVTLGDLTSALDAIGFDSSCVATTTAQEPTLEQDGVNAVWAIANALG 917          
BLAST of mRNA_H-canaliculatus_F_contig1347.2820.1 vs. uniprot
Match: A0A836CMV3_9STRA (HMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMV3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.910e-23
Identity = 73/200 (36.50%), Postives = 103/200 (51.50%), Query Frame = 0
Query:  570 PANGNSSSSARSCSTSPPLE----QTSSFISLSVSGMRCMENCGQTVQRALQAVPGVVSVTIHFPTRTASVNVDPGANVSLGDLTSALDAIGFVSTFVAST-----------------------------------------------TTKEPALGQDGVNAVWAIANALGLVDPGCAMAWGAPCSCGDD-CQCVNCPQH 717
            PA G  ++ ARS +++P       + ++++SL+V GM CM +CG+TV+R L  VPGVV+V++HFPTRTASV VDP +   +  L   L+A+GF +T ++                                                 T++EP + Q   NAVWAIA  LGLVD GC M+WG  C+C  D C+C NC  H
Sbjct: 1035 PAAGGDTAHARSPTSAPXXXXXXXRRATYVSLAVEGMMCMRDCGETVRRCLAGVPGVVTVSVHFPTRTASVQVDPASGAGIETLVERLEAVGFQATCISRCAVDMQSMCRVMRNVRSSQGTLRVLQSIXXXXXXXXXXXXXXXXXXXXTSEEPMVAQS-ENAVWAIAEVLGLVDRGCPMSWGGACACDPDKCRCTNCDVH 1233          
BLAST of mRNA_H-canaliculatus_F_contig1347.2820.1 vs. uniprot
Match: A0A6F8U617_9GAMM (HMA domain-containing protein n=1 Tax=Halomonas hydrothermalis TaxID=115561 RepID=A0A6F8U617_9GAMM)

HSP 1 Score: 54.3 bits (129), Expect = 1.450e-5
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
Query:  594 FISLSVSGMRCMENCGQTVQRALQAVPGVVSVTIHFPTRTASVNVDPGANVSLGDLTSALDAIGF 658
             I L+VSGM C + C   V+ AL+ +PGV SV + +P RTASV VDPG   S   LT A+  +G+
Sbjct:    1 MIELNVSGMTC-DRCADHVREALEKLPGVQSVEVSYPQRTASVAVDPGTPASA--LTFAVTRLGY 62          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1347.2820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LC61_ECTSI1.030e-8738.89Putative copper transporter n=1 Tax=Ectocarpus sil... [more]
A0A6H5KKC5_9PHAE4.130e-5334.11HMA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CMV3_9STRA1.910e-2336.50HMA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6F8U617_9GAMM1.450e-547.69HMA domain-containing protein n=1 Tax=Halomonas hy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 597..658
e-value: 2.9E-8
score: 34.0
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 594..662
score: 14.114
NoneNo IPR availableGENE3D3.30.70.100coord: 595..663
e-value: 9.9E-13
score: 50.4
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 594..659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1347contigH-canaliculatus_F_contig1347:19259..25096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1347.2820.1mRNA_H-canaliculatus_F_contig1347.2820.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1347 17305..26739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1347.2820.1 ID=prot_H-canaliculatus_F_contig1347.2820.1|Name=mRNA_H-canaliculatus_F_contig1347.2820.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=764bp
MTSAQSGADVLCIKHGGGKRCMVPGCQKLVRKNNRCTKHASEGSGNADTP
RATSVSVSASTAAKTAKAKAAVAATSAALAEATTRTSPAAAPPVPRRRAE
SSSRIEPVDHSSSSTVQAPRAPPERRETSASTGRPSHHEAFRGSSTQQSK
SPALLPQPVAEGDNGRGGYAGGGPSAVMSSIACPPPSSYFAPHADFSFRG
GSLSAFNPPLAAFGSRVAPAVPAAVAEPLSQDGTARGTFGGVRDDVMSSS
SGCSPPPPSAGDQVPRYRGRLPGIDSLRSLSLDKQNAPSEASPLARSMDP
IQSPNYSAAAHLLSLGGSMPRDRDVPPGNIAPTAGIGRTDGLSDSLALPG
RGSGGSSPAQRPRAPCPSPLYRGTRFSNGTLERSPSLSPLPPSPLLQPTP
TPAPAPFPTPHLPLPTVGDPQSANGGSRRVSSDPPGASSRAERGSIPVIP
PARPSAAVASDRAAAATCSSSSALPSSSVSAASGASGAASGAASDGRNGP
GAEKDPRTSIKSPSQGGDCRVSSEAAVAVEATARSPEEVPPTPATRPTQK
GPSCCGGKQSAAVHYTATPPANGNSSSSARSCSTSPPLEQTSSFISLSVS
GMRCMENCGQTVQRALQAVPGVVSVTIHFPTRTASVNVDPGANVSLGDLT
SALDAIGFVSTFVASTTTKEPALGQDGVNAVWAIANALGLVDPGCAMAWG
APCSCGDDCQCVNCPQHMKKVSHAVDLVLQAVDLSSAADPDSPPEKPHQP
QEQPHQEEQDLAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036163HMA_dom_sf
IPR006121HMA_dom