prot_H-canaliculatus_F_contig13461.2814.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13461.2814.1
Unique Nameprot_H-canaliculatus_F_contig13461.2814.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length659
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13461.2814.1 vs. uniprot
Match: A0A2K3LCP3_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LCP3_TRIPR)

HSP 1 Score: 56.6 bits (135), Expect = 8.410e-6
Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 0 
Query:  527 SECWIFDSGASGHVTPNADHLTNFRQCQRF-LRVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAYVPRLNYNLLSLPTIAADRPNSFFGDYLGIRLNLKGGKKVL 633
            SE W  DSG S H+TP+ + LT+F   ++  +++A    L  EG  ++ +  ++G    +V++ +V YVP++NYNL+S+  +       F     G  LNL   KK L
Sbjct:   46 SEEWFLDSGCSNHMTPHREWLTSFDASRKTSIKLADSRKLAAEGTYNIVIRGKTGN---KVIVEDVFYVPKMNYNLMSIGQLVE---KGFSVTIEGNSLNLFDAKKNL 147
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BLAST of mRNA_H-canaliculatus_F_contig13461.2814.1 vs. uniprot
Match: UPI001CDB8C50 (uncharacterized protein LOC122853856 n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDB8C50)

HSP 1 Score: 59.7 bits (143), Expect = 9.580e-6
Identity = 32/88 (36.36%), Postives = 53/88 (60.23%), Query Frame = 0 
Query:  525 GASECWIFDSGASGHVTPNADHLTNFRQCQRFL-RVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAYVPRLNYNLLSLPTIAADR 611
            G S+ W+FDSGAS H++   +  TN  + ++ L RV  G +L    +G + +   +G+  V++ L NV ++P L YNL S+ + AAD+
Sbjct:  284 GLSDKWLFDSGASYHMSGRKEWFTNMVKKEKSLIRVGDGKVLETNLYGTINISVFNGESWVKMSLNNVLFIPELKYNLFSMSS-AADK 370
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BLAST of mRNA_H-canaliculatus_F_contig13461.2814.1 vs. uniprot
Match: A0A026WX30_OOCBI (Copia protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WX30_OOCBI)

HSP 1 Score: 59.7 bits (143), Expect = 1.290e-5
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0 
Query:  519 VALQAGGASECWIFDSGASGHVTPNADHLTNFRQCQRFLRVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAYVPRLNYNLLSLPTIAADRPNSFFGDYLGIRL-NLKGGKKVLAPYVGKLY 641
             AL      E W  DSGAS H+TP  + LT+F++ ++ + +  G+ +   G GD+ ++   G+     VL  V YVP L  NL S+ +IA D+      D    R+ +  G  +  A   GKLY
Sbjct:  134 TALNTQSNREAWYLDSGASEHMTPRKEWLTDFKRIKKPVTIG-GTTIDATGIGDIKLETFDGKKWKPCVLKKVLYVPNLKLNLFSVSSIA-DKDCKIIIDKDTCRIVDNNGNTRATAERDGKLY 255
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13461.2814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2K3LCP3_TRIPR8.410e-633.33Retrovirus-related Pol polyprotein from transposon... [more]
UPI001CDB8C509.580e-636.36uncharacterized protein LOC122853856 n=1 Tax=Aphid... [more]
A0A026WX30_OOCBI1.290e-533.06Copia protein n=1 Tax=Ooceraea biroi TaxID=2015173... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 422..438
e-value: 0.084
score: 17.9
coord: 404..420
e-value: 0.0084
score: 24.0
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 404..420
e-value: 1.2E-4
score: 21.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 404..419
score: 9.603
NoneNo IPR availableGENE3D4.10.60.10coord: 396..439
e-value: 5.6E-9
score: 37.6
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 221..541
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 402..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13461contigH-canaliculatus_F_contig13461:230..2206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13461.2814.1mRNA_H-canaliculatus_F_contig13461.2814.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13461 32..2206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13461.2814.1 ID=prot_H-canaliculatus_F_contig13461.2814.1|Name=mRNA_H-canaliculatus_F_contig13461.2814.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=659bp
MVNARRQADERAQRSDVAMRGVTEQLASILGRLGVESQAQAAPGGSTAGR
SDPAGAALRENMRADASGAAAFQHRPAGNGGTVPAQVGPREGEPGEGGQD
RGFGLDGESAHAPSDFGRQDNPRRVAPHLKMTVPSLKTEKGWSAFRDKVV
IYAKYYGFDDVLSYKIHIEVGSKTIDLEQYMREFGVSSAEYDKHLRAWVF
LDQAFASNNDRGRMKRVLSPSLLWQETQKWYAPSTVGRQVELRRKFDRYK
YPKDPTEALYEIEDIASEIAMTGTPVDYQLVYSTFVSSLPDEYEYEVRQL
SEMESFDRGEILRKLRSAFEVMQRRKKNSPQGHALFTDGGRGGGGARGRG
RGRGGGRGGRGRSSSQGGRGSSTDNGGGKKTAENGGKTGGETTTAEKLVA
QGPRCYNCRRRGHISADCKHEVCKRCGGVGHNASTCSSSPDVEDGLMTIS
HPEHLDVPDPGDGYISAMAMMANDGEVEEMSFVATEVDGDDVEASSSGAC
GAQGESIGSGSPIGCEGSVALQAGGASECWIFDSGASGHVTPNADHLTNF
RQCQRFLRVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAYVPRLNYN
LLSLPTIAADRPNSFFGDYLGIRLNLKGGKKVLAPYVGKLYLQYGVRVDG
SVEEIACAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR001878Znf_CCHC