prot_H-canaliculatus_F_contig1344.2798.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1344.2798.1
Unique Nameprot_H-canaliculatus_F_contig1344.2798.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length91
Homology
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: D7G1H3_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H3_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.060e-50
Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 MSHSQMLSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKMDTSGLDISVTLEQNPLGGPTQQ 90
            MSH+QMLSLYRHIIRNARVYPSKSRDRVLKEIR EFRKNA ESDPVKVD QRQ+AMKGLQQLMVYTKMDTSGLD+SVTLEQNPLGGPTQQ
Sbjct:    1 MSHAQMLSLYRHIIRNARVYPSKSRDRVLKEIRLEFRKNATESDPVKVDEQRQLAMKGLQQLMVYTKMDTSGLDMSVTLEQNPLGGPTQQ 90          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: K8YXG1_NANGC (Complex1_LYR_dom domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXG1_NANGC)

HSP 1 Score: 97.8 bits (242), Expect = 2.820e-24
Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    6 MLSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKMDTSGLDISVTLEQNPLGGPTQQ 90
            +L LYR II+NA+V+PSK RDR+LKEIR EFR NA ESDP KV   R +A++GL QL  YT ++ S +D SVT+EQ PLGG +++
Sbjct:   15 VLHLYRRIIKNAKVFPSKGRDRMLKEIREEFRLNAKESDPEKVKHHRSMAIQGLSQLQAYTGLEDSDMDWSVTMEQAPLGGLSEE 99          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: A0A836CDN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.150e-13
Identity = 38/76 (50.00%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MSHS--QMLSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKMDTSGLD 74
            M+H+  QML LYRH++RNA+V+PS  RD ++++IR EFR+ A E+DP K++ +  VA+KGL+QLM YT +    +D
Sbjct:    1 MAHNKTQMLRLYRHVLRNAKVFPSIKRDALVQDIRIEFREGALETDPKKLEQRISVAVKGLEQLMAYTGLRKEDMD 76          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: A0A7S3AP29_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AP29_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 3.160e-10
Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    7 LSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKMDTSGLDISVTL 79
            LSLYRHI+R A+ +PS+ + +V+ EIRSEFR+N +E+DPVK+      A +GL+ L+  +++     D++  L
Sbjct:   24 LSLYRHILRAAQRWPSRKKSKVIDEIRSEFRRNQHEADPVKLRKMVSDAQQGLEALLSQSQLSERSQDVTYQL 96          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: A0A835YDR1_9CHLO (Complex1_LYR_dom domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YDR1_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 8.900e-8
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    7 LSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVY 65
            L+LYRHI++ A+ +PSK RD +++EI+SEFR N + +DP ++     +A +GL  L  Y
Sbjct:   10 LTLYRHILKAAKFFPSKKRDSIIREIKSEFRANKDLADPTRLSQCLTLAQRGLADLRSY 68          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: A0A7S3QQ30_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QQ30_DUNTE)

HSP 1 Score: 54.7 bits (130), Expect = 1.280e-7
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 MSHSQMLSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVY--TKMDTSGLDISVTLE 80
            MS   ML +YR I++ AR +PS  RDR++ EI+ +FR   + +DP ++   R++A +GL  L  Y     D  G DISV+L+
Sbjct:    1 MSGMPMLHVYRQILKAARFFPSIKRDRIIAEIKHDFRAKKDLTDPERLSHARELAERGLSDLQAYLPAARDAGG-DISVSLK 81          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: C1N3G8_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3G8_MICPC)

HSP 1 Score: 50.8 bits (120), Expect = 3.390e-6
Identity = 27/73 (36.99%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    7 LSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKMDT--SGLDISV 77
            L+LYRHI++ AR +PS++R  ++++I+ EFR+N   +D   + A+  +A  GL ++  YT +D+  S  D+S+
Sbjct:    6 LTLYRHILKAARTFPSRNRAGIIEDIKLEFRENRAVTDAAALRAKIALANDGLDRMRAYTGLDSGSSAWDVSL 78          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: A0A7S0QGN2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QGN2_9CRYP)

HSP 1 Score: 48.9 bits (115), Expect = 4.050e-5
Identity = 25/62 (40.32%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    7 LSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKM 68
            LS+YR ++R A+ +PSK RD +L++IR++FR++ + +D  K+   R  A+ GL  L  Y+K+
Sbjct:   52 LSVYRKLLRAAKSFPSKKRDSILQDIRTDFREHRSVTDMSKLLRYRSQALSGLSGLQHYSKV 113          
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Match: A0A7S0D9M8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D9M8_MICPS)

HSP 1 Score: 47.8 bits (112), Expect = 7.310e-5
Identity = 25/74 (33.78%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    7 LSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDAQRQVAMKGLQQLMVYTKMDTSGLDISVTLE 80
            L+LYRH+++ A  +PSK+RD +++EI++EFR    E+D   +  +  +A  GL +L  ++ +D       V+L+
Sbjct:   37 LTLYRHVLKAAARFPSKNRDGIVEEIKTEFRVARGETDGEVLKKKLALARDGLDRLRAFSGLDQGSAKWEVSLK 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1344.2798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G1H3_ECTSI1.060e-5093.33Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
K8YXG1_NANGC2.820e-2458.82Complex1_LYR_dom domain-containing protein n=3 Tax... [more]
A0A836CDN3_9STRA2.150e-1350.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3AP29_9EUKA3.160e-1042.47Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A835YDR1_9CHLO8.900e-844.07Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S3QQ30_DUNTE1.280e-740.24Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
C1N3G8_MICPC3.390e-636.99Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S0QGN2_9CRYP4.050e-540.32Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0D9M8_MICPS7.310e-533.78Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..90
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 5..61
e-value: 8.7E-15
score: 54.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1344contigH-canaliculatus_F_contig1344:15053..17256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1344.2798.1mRNA_H-canaliculatus_F_contig1344.2798.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1344 13860..17273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1344.2798.1 ID=prot_H-canaliculatus_F_contig1344.2798.1|Name=mRNA_H-canaliculatus_F_contig1344.2798.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=91bp
MSHSQMLSLYRHIIRNARVYPSKSRDRVLKEIRSEFRKNANESDPVKVDA
QRQVAMKGLQQLMVYTKMDTSGLDISVTLEQNPLGGPTQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR