prot_H-canaliculatus_F_contig13425.2786.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13425.2786.1
Unique Nameprot_H-canaliculatus_F_contig13425.2786.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length126
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13425.2786.1 vs. uniprot
Match: D8LIM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM2_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.360e-21
Identity = 71/125 (56.80%), Postives = 78/125 (62.40%), Query Frame = 0 
Query:    1 MTLPAVITAAQAAGLAAEKRMRDNRHRQPSXXXXXQAIAGEREEEDRVQAPAVPVGMGAKRVGRVRGRGTPPAQREETFVGPRSAAGSSDFANGSSVYGTGKSQIQASPQYWVPRKLSRSPLNKD 125
            MTLP VIT   AAG   ++RM D+R   P          GE EEE   Q+P V VGMGAKRVGRVRGRG   A  +    GPRS AG       S VYGTG SQIQASPQYWVPRKLSRSP+ K+
Sbjct:  210 MTLPDVITEGLAAG---DRRMMDSRSSLPH-------TVGEEEEE---QSP-VAVGMGAKRVGRVRGRGGAAAASQRG--GPRSTAGG--IGASSPVYGTGNSQIQASPQYWVPRKLSRSPMKKN 316
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13425.2786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM2_ECTSI1.360e-2156.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..126
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13425contigH-canaliculatus_F_contig13425:1162..1539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13425.2786.1mRNA_H-canaliculatus_F_contig13425.2786.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13425 1162..1539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13425.2786.1 ID=prot_H-canaliculatus_F_contig13425.2786.1|Name=mRNA_H-canaliculatus_F_contig13425.2786.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp
MTLPAVITAAQAAGLAAEKRMRDNRHRQPSPPPPTQAIAGEREEEDRVQA
PAVPVGMGAKRVGRVRGRGTPPAQREETFVGPRSAAGSSDFANGSSVYGT
GKSQIQASPQYWVPRKLSRSPLNKDS
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