prot_H-canaliculatus_F_contig13412.2782.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13412.2782.1
Unique Nameprot_H-canaliculatus_F_contig13412.2782.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length141
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13412.2782.1 vs. uniprot
Match: A0A6H5KQA2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.810e-22
Identity = 71/110 (64.55%), Postives = 77/110 (70.00%), Query Frame = 0 
Query:    1 WLSPPPRRGSSPPVDDQRARVQEGTGPAGTRTGERREGDDSAPPESAPGNTDDDDYIYPDXXXXXXXXXXXXXMNVAVGQAAGSIQDRAAVEDARQQELARVLAESRRDA 110
            ++ PPPRR    P     AR Q+GTGPAGTRT      DDSA PESAPGNT DD+YIYPD      XXXX   M+VAVGQ AG IQ RAA E ARQ+ELARVLAESRRDA
Sbjct:   28 FMPPPPRR----PRTHDGARDQDGTGPAGTRTD-----DDSASPESAPGNTRDDEYIYPDTGGVDDXXXXD--MHVAVGQPAGPIQGRAAEEAARQEELARVLAESRRDA 126
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BLAST of mRNA_H-canaliculatus_F_contig13412.2782.1 vs. uniprot
Match: D8LFQ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ3_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 6.860e-22
Identity = 72/110 (65.45%), Postives = 77/110 (70.00%), Query Frame = 0 
Query:    1 WLSPPPRRGSSPPVDDQRARVQEGTGPAGTRTGERREGDDSAPPESAPGNTDDDDYIYPDXXXXXXXXXXXXXMNVAVGQAAGSIQDRAAVEDARQQELARVLAESRRDA 110
            ++ PPPRR    P     A  Q+GTGPAGTRT      DDSA PESAPGNT DDDYIYPD     XXXXX   M+VAVGQ AG IQ RAA E ARQ+ELARVLAESRRDA
Sbjct:   28 FMPPPPRR----PRTHDGAHDQDGTGPAGTRTD-----DDSASPESAPGNTRDDDYIYPDTGGVDXXXXXD--MHVAVGQPAGPIQGRAAEEAARQEELARVLAESRRDA 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13412.2782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQA2_9PHAE3.810e-2264.55USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LFQ3_ECTSI6.860e-2265.45Ubiquitin carboxyl-terminal hydrolase family prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13412contigH-canaliculatus_F_contig13412:89..1181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13412.2782.1mRNA_H-canaliculatus_F_contig13412.2782.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13412 89..1181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13412.2782.1 ID=prot_H-canaliculatus_F_contig13412.2782.1|Name=mRNA_H-canaliculatus_F_contig13412.2782.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=141bp
WLSPPPRRGSSPPVDDQRARVQEGTGPAGTRTGERREGDDSAPPESAPGN
TDDDDYIYPDTDGGGDGDDDDDDMNVAVGQAAGSIQDRAAVEDARQQELA
RVLAESRRDARSDENASSGGAAEASSSQGSSSSRGASGEDV
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