prot_H-canaliculatus_F_contig13388.2752.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13388.2752.1
Unique Nameprot_H-canaliculatus_F_contig13388.2752.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length157
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13388.2752.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.760e-20
Identity = 96/157 (61.15%), Postives = 106/157 (67.52%), Query Frame = 0 
Query:    1 DRSSLIVEAISGLLGCERGKVTRTGMLSHGLEIFSQEXXXXXXXXXXAAAGPAAAPAAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGKRVVGDAVVVLAGGGVEHGAAGSGDVDGDGTANASRACNPLRLREELMRLR 157
            DR+SL+VEA+S LL C R  V    MLSHGL+++  +          A AG  AA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX          L G+R+VGDAVVVL GGG+ HGAAGSGDVDGDG AN  R CNPLRLREELMR R
Sbjct:  585 DRASLVVEAVSALLECGRESVASACMLSHGLDLYYNKDVE-------AEAGDGAA---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDGEANGDRTCNPLRLREELMRER 725
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BLAST of mRNA_H-canaliculatus_F_contig13388.2752.1 vs. uniprot
Match: A0A6H5L4V6_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V6_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 3.610e-20
Identity = 84/157 (53.50%), Postives = 95/157 (60.51%), Query Frame = 0 
Query:    1 DRSSLIVEAISGLLGCERGKVTRTGMLSHGLEIFSQEXXXXXXXXXXAAAGPAAAPAAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGKRVVGDAVVVLAGGGVEHGAAGSGDVDGDGTANASRACNPLRLREELMRLR 157
            DR+SL+VEA+S LL C R  V    MLSHGL+++  +          A A                      XXXXXXXXXXXXXXXXXXXXX          L G+R++GDAVVVL GGG+ HGAAGSGDVDGDG AN  R CNPLRLREELMR R
Sbjct:  932 DRASLVVEAVSALLECSRESVASACMLSHGLDLYYNKDVEAGAEDGLAVAS-----------------SLDGXXXXXXXXXXXXXXXXXXXXXAPVTNERASGLAGRRIMGDAVVVLVGGGMGHGAAGSGDVDGDGAANGDRTCNPLRLREELMRER 1071
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13388.2752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS90_ECTSI2.760e-2061.15eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L4V6_9PHAE3.610e-2053.50Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13388contigH-canaliculatus_F_contig13388:746..1786 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13388.2752.1mRNA_H-canaliculatus_F_contig13388.2752.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13388 746..1786 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13388.2752.1 ID=prot_H-canaliculatus_F_contig13388.2752.1|Name=mRNA_H-canaliculatus_F_contig13388.2752.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp
DRSSLIVEAISGLLGCERGKVTRTGMLSHGLEIFSQEEEEEEEPPSGAAA
GPAAAPAAALASAPAAALASAAGSDVDGGVGQGGSRHVQKGGAAAVTNER
ASRLTGKRVVGDAVVVLAGGGVEHGAAGSGDVDGDGTANASRACNPLRLR
EELMRLR
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