prot_H-canaliculatus_F_contig13338.2725.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13338.2725.1
Unique Nameprot_H-canaliculatus_F_contig13338.2725.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length593
Homology
BLAST of mRNA_H-canaliculatus_F_contig13338.2725.1 vs. uniprot
Match: D7FZT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT0_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.590e-65
Identity = 159/347 (45.82%), Postives = 195/347 (56.20%), Query Frame = 0
Query:  247 LLQAWLRLWAPMAWFAATLLATLVLAGLRLLGVSGRYLPAGWIGSPVMLTLFLLALHSLLILDGSGGRGGGSVMRGGGDPLAVALMGRRPFVLLSLFAALLVAAKIDSTAGISDGWWSNLAGLIGKAHWGLVFSPLWAMFVLIEAVYLAALWENYSGKSLAC-ALFGRVRQDLRSVGGLGYWLCCXXXXXXXXXXXXXXSV-CQCPPWGWGHGTSSGVYSRLGGQDEXXXXXXXXLSAHGG---------------AGGWTGRGSYDRAPYRHHAPADATTYVSSFGPIRQRMELNPGQRAAAAAIASGVFLLTISVISVTVGSTRKESNWGVPLTIVTAAAGLAMV 576
            LLQAWLRLW  MA F  TL   ++L  LRLLGVS  +L A WI SP +L L LLALHSL+ILDGSGG GG  V+R GG+ L V L GRRP +LL+L AA+LV  KIDS AG S      +   I K HWG VF PLW +  ++E VYL ALWENY+ +SL    LFG VR DLR +GG+GYW CC              +  C    W W     SG     G  ++     XXX                     +G + G G       R   P DA  YVS   P+R+R+EL P QRAAA  I++G  LLT  ++S+ VGS  ++++WGVPLT+VTA  G  MV
Sbjct:  385 LLQAWLRLWLTMAAFGVTLSVFMILLSLRLLGVSSHHLTAFWIASPGLLALTLLALHSLVILDGSGGYGGAPVLRVGGNRLVVVL-GRRPVILLTLLAAVLVVLKIDSVAGGSGA----VMEAIEKVHWGYVFLPLWVIVCMLETVYLGALWENYTRRSLTFPGLFGGVR-DLRGLGGVGYWFCCCLGGRRGYAGDGGENGGCH---WQWRRTWWSGEKYGDGDSEDPLVSDXXXXXXXXXXXXXXXXXXXXXXXTSGKFGGFG-------RESPPTDAEAYVSCSSPVRRRVELTPSQRAAAITISAGAILLTACLVSLIVGSNDEQADWGVPLTMVTATTGFGMV 715          
BLAST of mRNA_H-canaliculatus_F_contig13338.2725.1 vs. uniprot
Match: A0A6H5KJX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX7_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.420e-59
Identity = 156/342 (45.61%), Postives = 191/342 (55.85%), Query Frame = 0
Query:  258 MAWFAATLLATLVLAGLRLLGVSGRYLPAGWIGSPVMLTLFLLALHSLLILDGSGGRGGGSVMRGGGDPLAVALMGRRPFVLLSLFAALLVAAKIDSTAGISDGWWSNLAGLIGKA----HWGLVFSPLWAMFVLIEAVYLAALWENYSGKSLAC-ALFGRVRQDLRSVGGLGYWLCCXXXXXXXXXXXXXXSVCQCPPWG--WGHGTSSGV----------YSRLGGQDEXXXXXXXXLSAH-GGAGGWTGRGSYDRAPYRHHAPADATTYVSSFGPIRQRMELNPGQRAAAAAIASGVFLLTISVISVTVGSTRKESNWGVPLTIVTAAAGLAMVSDSLR 581
            MA F  TL   ++L  LRLLGVS  YLPA WI SP +L L LLALHSL+ILDGSGG GG  V++ GG+ L V L GRRP +LL+L AA+LV  KIDS AG S        G++ +A    HWG    PLW +  ++EAVY+ ALWENY+ +SL    LFG VR DLR +GGLGYW CC                     W   W  G  +G           Y    G+ +XXXXXXX  S   GGAG             R   P DA  Y S   P+RQR+EL P QRAAA  I+ G  LLT  ++S+  GST +++NWGVPLT++ A  G  MV   +R
Sbjct:  417 MAAFGVTLSVFMILLSLRLLGVSAHYLPAFWIASPGLLALTLLALHSLVILDGSGGYGGAPVLQVGGNRLVVVL-GRRPIILLTLLAAVLVVLKIDSFAGGS--------GVVMEAMEMVHWGYALLPLWVIVCMLEAVYVGALWENYTRRSLTFPGLFGGVR-DLRGLGGLGYWFCCCLGGRGGYAGDGGKGGGCHWQWRRTWWSGEKNGDDDFEDPLVKDYDEYEGKQQXXXXXXXGTSGKFGGAG-------------RESPPTDAQAYASYSSPVRQRVELTPSQRAAAITISVGTILLTACLVSLISGSTDEKANWGVPLTMIAATTGFGMVGAGVR 735          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13338.2725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZT0_ECTSI1.590e-6545.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJX7_9PHAE1.420e-5945.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 592..593
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 359..377
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 530..554
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 309..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 275..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 399..529
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 555..559
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..308
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 337..358
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 560..580
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..274
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 378..398
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 581..593
NoneNo IPR availableTMHMMTMhelixcoord: 68..87
NoneNo IPR availableTMHMMTMhelixcoord: 559..576
NoneNo IPR availableTMHMMTMhelixcoord: 375..397
NoneNo IPR availableTMHMMTMhelixcoord: 530..552
NoneNo IPR availableTMHMMTMhelixcoord: 286..308
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 328..350
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13338contigH-canaliculatus_F_contig13338:641..2997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13338.2725.1mRNA_H-canaliculatus_F_contig13338.2725.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13338 641..3021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13338.2725.1 ID=prot_H-canaliculatus_F_contig13338.2725.1|Name=mRNA_H-canaliculatus_F_contig13338.2725.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=593bp
MDVLWCFLPVTLACLWLIVELARSVVLVRRAMLDEEGRRVLSVRRMRRRL
QRRSLRAGLQRQQQHRDVVAFAAAAAAAAAAAAAAASSSSRQGRRADSGA
SDFDDDEGDDEEDDGGDNDDDSGGGGGDYSGGGGGGARGETAESSDLPAA
AAATAKDPASFPSLLSLYEWKEAEKDQEQGGGRVWRPRHSSDTTSGGRSR
RGSRGGGGGGGRGAGEPKSLSPTSAPPSPSSSPGSDPARRAVRISFLLQA
WLRLWAPMAWFAATLLATLVLAGLRLLGVSGRYLPAGWIGSPVMLTLFLL
ALHSLLILDGSGGRGGGSVMRGGGDPLAVALMGRRPFVLLSLFAALLVAA
KIDSTAGISDGWWSNLAGLIGKAHWGLVFSPLWAMFVLIEAVYLAALWEN
YSGKSLACALFGRVRQDLRSVGGLGYWLCCCCCRCYPGSSGGGGSVCQCP
PWGWGHGTSSGVYSRLGGQDEQQQQQQQQLSAHGGAGGWTGRGSYDRAPY
RHHAPADATTYVSSFGPIRQRMELNPGQRAAAAAIASGVFLLTISVISVT
VGSTRKESNWGVPLTIVTAAAGLAMVSDSLRGDSSRAHKRPSR
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