prot_H-canaliculatus_F_contig13284.2684.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13284.2684.1
Unique Nameprot_H-canaliculatus_F_contig13284.2684.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length122
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13284.2684.1 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 6.160e-12
Identity = 52/122 (42.62%), Postives = 63/122 (51.64%), Query Frame = 0 
Query:    1 EFQDNGIQGAGVLYPSPASRFGARDDRGPSSPGMAAAGYLLFDGSFEGFGGELARGSSASGPAFVDTTSVSPYFASLERGSGGGGEGHCDPRGRQRRYYLDGLGNGDGDDDDAHPTRSPHFA 122
            EFQD G +G GVLYPSPASRFGARD  GPSS   +    L F     G G +   GSS++        +VSPYFA+     G            + RY+       +G DDD HPT SP+FA
Sbjct:  477 EFQDQGFRGEGVLYPSPASRFGARDT-GPSSSSSSRMPGLSFSAG-GGVGDDNLPGSSSA--------AVSPYFAASFEDDG------------KSRYH-------EGYDDDGHPTSSPYFA 569
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BLAST of mRNA_H-canaliculatus_F_contig13284.2684.1 vs. uniprot
Match: A0A6H5JWV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV7_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 7.080e-6
Identity = 36/75 (48.00%), Postives = 39/75 (52.00%), Query Frame = 0 
Query:    1 EFQDNGIQGAGVLYPSPASRFGARDDRGPSSPGMAAAGYLLFDGSFEGFGGELARGSSASGPAFVDTTSVSPYFA 75
            E  D G +G GVLYPSPASRFGARD  GPSS      G     G   G G +   GSS +         VSPYFA
Sbjct:  399 EAMDEGSRGEGVLYPSPASRFGARDT-GPSSSSWRMPGLSFIPGG--GIGDDNVPGSSVA---------VSPYFA 461
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13284.2684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9D8_ECTSI6.160e-1242.62MutL protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JWV7_9PHAE7.080e-648.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13284contigH-canaliculatus_F_contig13284:49..414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13284.2684.1mRNA_H-canaliculatus_F_contig13284.2684.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13284 49..415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13284.2684.1 ID=prot_H-canaliculatus_F_contig13284.2684.1|Name=mRNA_H-canaliculatus_F_contig13284.2684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=122bp
EFQDNGIQGAGVLYPSPASRFGARDDRGPSSPGMAAAGYLLFDGSFEGFG
GELARGSSASGPAFVDTTSVSPYFASLERGSGGGGEGHCDPRGRQRRYYL
DGLGNGDGDDDDAHPTRSPHFA
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