prot_H-canaliculatus_F_contig1328.2680.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1328.2680.1
Unique Nameprot_H-canaliculatus_F_contig1328.2680.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length805
Homology
BLAST of mRNA_H-canaliculatus_F_contig1328.2680.1 vs. uniprot
Match: D8LDV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV2_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.230e-66
Identity = 243/646 (37.62%), Postives = 305/646 (47.21%), Query Frame = 0
Query:  212 VAARERVSDD-NGGNSG-APHGASGQWSATYQ-AHEDALLGGNPAG--SEWRG--------RRLPPAPYGDTLDEGIHPSRGGGGVAAQANRGRRSLSDFLREIEDMVRAQREQRDDLEIVSPRTRAAPHPHQSTRSRPLAXXXXXXXXXXSHHRQMSGTYGRHVDNGSAHIPGSVRYVPPGGRVLSQPAGDSQSLRQRLAGANNIAGMAAAPSSHLRDHHNVYERSEWNHTPFTRSPGLSPNVTNSAHPPMP-----GYGIPTLAIAAAAVAAARETRSEAADTETGASAPGRWPRSTVRDPLNPPFQLSAAATAFSMSTHGNRPIGLRHDEEPGASNGGVSA-----EDLARQQGSDPSRPWHTAIMRRMAEPAPRGIPAGNSGGEGHVHRDG---AIFSSGATTRAETTAAVTAIAAHLQRGETDPSLVSNGVG--------------IDQEGRMQQESRSTELQVVPLSRMVTLPPEGTAATMGVEAGVRPDEARQDG------QDNNPSQSNRAALPVFRHWESQRARLRIQWHE-----QVLP-ESPASDGTLVLTEGLSPSNGPSPQARGRGGFGRYGGARLGTGSLXXXXXXXXXXXNDNASKVEEALFSCLMSLGVRRLLLERGSGETSAGAGNRRR 805
             AA +R S   NGG+ G +   A GQ  A  + AH +A    NP G  S  RG        R     P GD ++  +        +A+Q +RGRRSLSDFLRE+E+MVR QR +  D +   PR + AP       S P+A                SG+Y         HI G+ RYVPPG R + + A D+    Q   G N  A +A +P  H      V+E    N  P +   G +  + N  + P P     GY  PTL  +A  VAA        A T T  +A G  P   V  PL+   +LSA ATAFSMS  G       H E   A+ GG+S      E+LARQ+    S+ W  A+ +     A RG+  G+  G     + G   A+F                 A H Q G   P  + +G                I  +G +QQ      LQ++PLSRM  LPPE   A  G  A    D +  D       QD + +Q + A LP FRHWESQRARLRIQWHE     +++P ESP SDGTLV+TE L PSNGPSP+     GF R G AR         XXXXXX   D+ SKVEEALFSCLMSL +RRLL+ERG G     AGN RR
Sbjct:    4 AAAHDRSSHGGNGGDGGNSRFDAPGQRPAGMRRAHAEAFQSRNPPGWPSGGRGALFAGERQRETGERPDGDQVNSSLRDEV----MASQMHRGRRSLSDFLREVEEMVRRQRVESRDPDQFPPRPQTAPQSPTGAHSHPVAATARGMAAIPPQGYPTSGSYDGRSATSGPHIGGTARYVPPGRRQMLRAAADAHLPYQPPVGTNAAARLATSPFHHAT----VFELPGGNTAPPSGIAGRTRTLPNPTYTPRPFSMPAGYEAPTLPTSA--VAAXXXXXXXXAATNTAVAAQGERPPVPV--PLSSSSRLSAVATAFSMSPGGYGAPDQNHHEATAAAEGGISGLTGTEEELARQERW--SQEWTMAVQQH----ALRGLSVGDGAGAHAQQQHGDSPAVF-----------------AGHRQPGGVVPIGIPDGSSGLIPQERFTQAQREIYHDGPLQQGRHGPFLQMIPLSRMTALPPEAGTADGGGTAPPAMDGSYDDRVGEAIEQDQDSAQGHLAVLPAFRHWESQRARLRIQWHEPANAPELVPMESPGSDGTLVVTEHL-PSNGPSPR-----GFDRNG-ARQENADFRSGXXXXXX---DDVSKVEEALFSCLMSLDIRRLLMERGKGVIPR-AGNHRR 603          
BLAST of mRNA_H-canaliculatus_F_contig1328.2680.1 vs. uniprot
Match: A0A6H5KV82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV82_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 3.320e-48
Identity = 203/540 (37.59%), Postives = 246/540 (45.56%), Query Frame = 0
Query:  284 VAAQANRGRRSLSDFLREIEDMVRAQREQRDDLEIVSPRTRAAPHPHQSTRSRPLAXXXXXXXXXXSHHRQMSGTY-GRHVDNGSAHIPGSVRYVPPGGRVLSQPAGDSQSLRQRLAGANNIAGMAAAPSSHLRDHHNVYERSEWNHTPFTRSPGLSPNVTNSAHPPMPGYGIPTLAIAAAAVAAARETRSEAADTETGASAPGRWPRSTVRDPLNPPFQLSAAATAFSMSTHGNRPIGLRHDEEPGASNGGVSA-----EDLARQQGSDPSRPWHTAIMRRMAEPAPRGIPAGNSGGEGHVHRDGAIFSSGATTRAETTAAVTAIAAHLQRGETDP--SLVSNGVGIDQEGRMQQESRSTELQVVPLSRMVTLPPEGTAATMGVEAGVRPDEARQDG------QDNNPSQSNRAALPVFRHWESQRARLRIQWH----EQVLPESPASDGTLVLTEGLSPSNGPSPQARGRGGFGRYGGARLGTGSLXXXXXXXXXXXNDNASKVEEALFSCLMSLGVRRLLLERGSGETSAGAGNRRR 805
            +A+Q +RGRRSLSDFLRE+E+MVR QR +  D + V  R + AP P       P+A                SG Y GR+  +G   I G+ RYVPPG R LS+ A D+ S  Q   GA   A +A +P  H      VY+    N  P +   G +  + N  + P  G                                     R  V  PL+   +LSAAATAFSMS  G         E   A+ GG+S      E+LARQ+    S+ W  A+ +     AP G+  G+  G     + G   S  A         V  I          P  S       I   G +QQ      LQ+VPLSRM  LPPE   A  G  A    D +  D       QD + +Q + A LP FRHWES RARLRIQ      E V  ESP SDGTLV+TE L  SNG SP+   R G      AR         XXXXXXXX D  SKVEEALFSCLMSL +RRLL+ERG G     AGN RR
Sbjct:   85 MASQMHRGRRSLSDFLREVEEMVRRQRAEARDPDQVPSRPQTAPQPSTGVHLHPVAATARGMAAIPPQGYPTSGRYDGRNATSGPQ-IGGTARYVPPGRRQLSRTAADAHSPYQPPVGATAAARLATSPFHHPT----VYDLPGGNTAPPSGIAGRTRTLPNPTYMPQGG-------------------------------------RPPVPFPLSSSSRLSAAATAFSMSPGGYSAPDQNQHEASAAAEGGISGLAGTEEELARQERW--SQEWTMAVQQH----APHGLSVGDGAGAHAQQQHG--NSPAAVAGQHQPGGVVRIGNPDGSSGLSPQQSFTQAQREIYHGGPLQQGRHGPFLQMVPLSRMTVLPPEAGTADGGGTAPPAVDGSYDDRVGEAVEQDQDSAQGHLAVLPAFRHWESHRARLRIQEPANSPELVPMESPGSDGTLVVTEHLL-SNGSSPRGVDRNG------ARQENADFRSGXXXXXXXXXD-VSKVEEALFSCLMSLDIRRLLMERGKG-VIPWAGNHRR 565          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1328.2680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDV2_ECTSI1.230e-6637.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV82_9PHAE3.320e-4837.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1328contigH-canaliculatus_F_contig1328:3709..8036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1328.2680.1mRNA_H-canaliculatus_F_contig1328.2680.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1328 3709..8036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1328.2680.1 ID=prot_H-canaliculatus_F_contig1328.2680.1|Name=mRNA_H-canaliculatus_F_contig1328.2680.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=805bp
MGDNIPHYRGGHEAPESPLVFSVPTSLQEYMSSRHMEIPAERAPPPPLGA
TPSPEPVSVRHRFDSGIINNFTDARPASASPPGRSATTAHQHHADHRSSA
TLESARGPGRPLRSDYLAAWRAISERPHPGPVESVQEHQGQHSTRQRFGA
HRSEADPDNGEGRMGRRRVQAHSSSRGGRPQSSTAARRSGGGLSGGWSGG
GAGQVSLSPMNVAARERVSDDNGGNSGAPHGASGQWSATYQAHEDALLGG
NPAGSEWRGRRLPPAPYGDTLDEGIHPSRGGGGVAAQANRGRRSLSDFLR
EIEDMVRAQREQRDDLEIVSPRTRAAPHPHQSTRSRPLAAAAAAMAAAAS
HHRQMSGTYGRHVDNGSAHIPGSVRYVPPGGRVLSQPAGDSQSLRQRLAG
ANNIAGMAAAPSSHLRDHHNVYERSEWNHTPFTRSPGLSPNVTNSAHPPM
PGYGIPTLAIAAAAVAAARETRSEAADTETGASAPGRWPRSTVRDPLNPP
FQLSAAATAFSMSTHGNRPIGLRHDEEPGASNGGVSAEDLARQQGSDPSR
PWHTAIMRRMAEPAPRGIPAGNSGGEGHVHRDGAIFSSGATTRAETTAAV
TAIAAHLQRGETDPSLVSNGVGIDQEGRMQQESRSTELQVVPLSRMVTLP
PEGTAATMGVEAGVRPDEARQDGQDNNPSQSNRAALPVFRHWESQRARLR
IQWHEQVLPESPASDGTLVLTEGLSPSNGPSPQARGRGGFGRYGGARLGT
GSLGSLGSFGGGGGNDNASKVEEALFSCLMSLGVRRLLLERGSGETSAGA
GNRRR
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