prot_H-canaliculatus_F_contig13202.2638.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13202.2638.1
Unique Nameprot_H-canaliculatus_F_contig13202.2638.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length390
Homology
BLAST of mRNA_H-canaliculatus_F_contig13202.2638.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 5.270e-97
Identity = 225/402 (55.97%), Postives = 263/402 (65.42%), Query Frame = 0
Query:    2 SAAAGAVLKGLGEAGGALMSMRDSEIARLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALLAEREAALHEIGVKEAELAKKETLLQEGKARATVEVQEKEELVSSLKVENQALQAALERLRHDFQEERALRLRHDRRSSPATR------QRSQPSTPARLGIMGRMSLASRHGTPPSAAALAAAPAPAPGARGLEARGARRSEGGVGTRPPPKTPTRSGEMAGPELHNHLARSTPHRAGRASLGRGGR-PGGAPTVAAIA-----GWDSNHGGIGSRHNYPVLSAAGRAGSGGES--EEEERGQDRQGLPWILNTDQIWVGAVRPPHEVLVHLLDELEDLKVTHGGGSGSAEDLGKGFVAETEAFVEWSHRTGELQRVPPLESVDLPGEKKFTEGCLR 389
            S AAGAVLKGLGEAGGALMSMRDSEI+RLRRAYARSELSREEMKRCLRALAVQLREGEDRTGAL+A+REAAL ++  KE E AKKE +L+EGKARAT EVQ++EELV+SL+VEN+ALQAALERLR DFQEER+LRL+    S PA         + +PSTP+RLGI  R  L SR G                G  G  A     S  G   RPP      S  ++G    NH  RSTP R G+     GGR  GG+  +AA A     GW S H GIGSRH+    + A  AG G E+  +E    Q  +GLPWILNTDQ           VL HLL+ELE +K   G      E+  +G +AET AF+EWSHRTGELQ +PPLE+VD+PGE+ FTEGCL+
Sbjct: 1059 STAAGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALMADREAALCKLSAKEEEFAKKEAVLEEGKARATAEVQQQEELVTSLQVENEALQAALERLRLDFQEERSLRLQ----SGPAAAXXXXXXSKVRPSTPSRLGIFRRRGLTSRDG----GGTXXXXXXXXXGEEGQPA-----SRHGSVARPPATPSRHSRLLSGSSFLNHHIRSTPGRPGQ-----GGRLAGGSGAIAAAATPGGVGWSSVHRGIGSRHS----TTAAAAGGGSETWVQEVAGAQAVEGLPWILNTDQ-----------VLNHLLEELEGIKAMSG------EEKEEGSIAETAAFIEWSHRTGELQELPPLETVDMPGERAFTEGCLK 1421          
BLAST of mRNA_H-canaliculatus_F_contig13202.2638.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 1.270e-67
Identity = 174/389 (44.73%), Postives = 202/389 (51.93%), Query Frame = 0
Query:    2 SAAAGAVLKGLGEAGGALMSMRDSEIARLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALLAEREAALHEIGVKEAELAKKETLLQEGKARATVEVQEKEELVSSLKVENQALQAALERLRHDFQEERALRLRHDRRSSPATRQRSQPSTPARLGIMGRMSLASRHGTPPSAAALAAAPAPAPGARGLEARGARRSEGGVGTRPPPKTPTRSGEMAGPELHNHLARSTPHRAGRASLGRGGRPGGAPTVAAIAGWDSNHGGIGSRHNYPVLSAAGRAGSGGESEEEERGQDRQGLPWILNTDQIWVGAVRPPHEVLVHLLDELEDLKVTHGGGSGSAEDLGKGFVAETEAFVEWSHRTGELQRVPPLESVDLPGEKKFTEGCLRV 390
            S AAGAVLKGLGEAGGALMSMRDSEI+RLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALLA+REAAL ++  KE E  KKE +L+EGKARAT EVQ+KEELV+SL+VEN+ALQAALERLR DFQEER+LRL+                                    P+AAA AAA                                                                       + +  W +                             ER              + W    RPPHEVL HLL+ELE +K   GG      +  +G +AET AF+EWSHRTGELQ VPPLE+VD+PGE+ FTEGCL++
Sbjct:  999 STAAGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALLADREAALCKLNAKEEEFTKKEAVLEEGKARATAEVQQKEELVTSLQVENEALQAALERLRLDFQEERSLRLQSG----------------------------------PAAAAAAAA-----------------------------------------------------------------------SKVDTWKAR---------------------------AER--------------EAWADGARPPHEVLNHLLEELEGIKAMSGG------EQEEGSIAETAAFIEWSHRTGELQEVPPLETVDMPGERAFTEGCLKL 1235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13202.2638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAS6_9PHAE5.270e-9755.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK06_ECTSI1.270e-6744.73CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13202contigH-canaliculatus_F_contig13202:465..3170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13202.2638.1mRNA_H-canaliculatus_F_contig13202.2638.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13202 465..3170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13202.2638.1 ID=prot_H-canaliculatus_F_contig13202.2638.1|Name=mRNA_H-canaliculatus_F_contig13202.2638.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=390bp
SSAAAGAVLKGLGEAGGALMSMRDSEIARLRRAYARSELSREEMKRCLRA
LAVQLREGEDRTGALLAEREAALHEIGVKEAELAKKETLLQEGKARATVE
VQEKEELVSSLKVENQALQAALERLRHDFQEERALRLRHDRRSSPATRQR
SQPSTPARLGIMGRMSLASRHGTPPSAAALAAAPAPAPGARGLEARGARR
SEGGVGTRPPPKTPTRSGEMAGPELHNHLARSTPHRAGRASLGRGGRPGG
APTVAAIAGWDSNHGGIGSRHNYPVLSAAGRAGSGGESEEEERGQDRQGL
PWILNTDQIWVGAVRPPHEVLVHLLDELEDLKVTHGGGSGSAEDLGKGFV
AETEAFVEWSHRTGELQRVPPLESVDLPGEKKFTEGCLRV
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