prot_H-canaliculatus_F_contig13081.2544.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13081.2544.1
Unique Nameprot_H-canaliculatus_F_contig13081.2544.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length335
Homology
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 7.340e-27
Identity = 143/304 (47.04%), Postives = 162/304 (53.29%), Query Frame = 0
Query:    1 MSQCGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRCIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQQAPAAGGGGSGNSSGKIPGSSCAQQQGNEGFGGLRSKRCGRHGCTLQATYVSSQGNERAEFCAQHANDGILPAGIISGFGEYGIGGHAAGGAAAGVKRKQPSPPSPYALAMA-----GFSAGATGSAXXXXXXXXXXXSG----------TKRAALPTAPVMQ---------------FQPQVQPHSGRYTSGSGDSLQFRHHPSQRYLAEG 274
            MSQCGH +C+KRPTYGVAGS KREFCSQHA++GM+NVNNKRCI  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +              KIPG+                            +Y+S QGNE+AEFC +HAND IL AGI   FGEYG  G       AG KRKQP P +PY L M      G SAG    +           +           T R A   AP  Q               F+P   P + R+   +     FR  PS+R L EG
Sbjct:   61 MSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGEVSRGS---------KIPGAXXXXXX--XXXXXXXXXXXXXXXXXXXXSYISGQGNEKAEFCGKHANDQILSAGI---FGEYGDAGAXXXXXEAGAKRKQPPPIAPYELGMGRMVPPGLSAGMAARSDIPNKRTAVLPAAAASVPPPFMMTPRPAFSGAPQQQQQPNDTRYVKNESLEFRPLSAPSNDRHLGAAESLAHFRSSPSERCLMEG 350          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 4.190e-22
Identity = 160/384 (41.67%), Postives = 181/384 (47.14%), Query Frame = 0
Query:    1 MSQCGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRCIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQQAPAAGGGGSGNSSGKIPGSSCAQQQGNEGFGGLRSKRCGRHGCTLQATYVSSQGNERAEFCAQHANDGILPAGIISGFGEYGIGGH--AAGGAAAGVKRKQPSPPSPYALAMA-----GFSAGATGSAXXXXXXXXXXXSGTKRAALPTAPV-------------------------------------MQFQPQVQPHSGRYTSGSGDSLQFRHHPSQRYLAEGPQFPPQPHERYLGGGGS---QFRAQSA---ERYHIGGAGLTPVGAAGESGGYSDEIATVFDKEMPL 334
            MSQCGH +C+KRPTYGVAGS KREFCSQHA++GM+NVNNKRCIQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +          KIPG+                                              ND IL AG+   FGEYG  G   A        KRKQP P +PY L M      G SAG    +              + A LP A                                       ++F+P   P + RY   +     FR  PS+RY+              LGGGG    QFR Q     +RY  G AGL PVGA  ES  YS+EIA VFD+EMPL
Sbjct:    1 MSQCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRCIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----------KIPGACXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDEILAAGM---FGEYGDAGATPAXXXXXXXXKRKQPPPIAPYELGMGRMVPPGLSAGMAARSDIPNK---------RTAVLPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNDTRYVKNESLEFRPLSAPSNDRYLGAAESLAHFRASPSERYMNN------------LGGGGGEMQQFRPQQLSPNDRY--GAAGLMPVGA--ESSAYSEEIAAVFDREMPL 344          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.240e-6
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    4 CGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRC 42
            C  H C+ RP+YG+ GS K EFCS+H+K GM NV  KRC
Sbjct:   31 CQEHGCTARPSYGIDGSKKAEFCSKHSKPGMTNVTKKRC 69          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: A0A6H5KY67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY67_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.980e-6
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    4 CGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRC 42
            C  H C+ RP+YG+ G  K EFCS+H+K GMIN+  KRC
Sbjct:   27 CQEHGCTVRPSYGIDGCKKAEFCSKHSKPGMINLTKKRC 65          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: D7FWU8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU8_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.140e-5
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    3 QCGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRC 42
            +C H  CSKRPTYGV  S KRE CSQHA+  M+N++  RC
Sbjct:   55 KCLHPGCSKRPTYGVEASRKRECCSQHARPWMVNIDLTRC 94          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: D7FLW1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW1_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 3.200e-5
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    4 CGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRC 42
            C    CS RP+YG   S K EFCSQHAK+GM+NV +KRC
Sbjct:  248 CEEIGCSMRPSYGKDNSKKAEFCSQHAKQGMVNVVHKRC 286          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: A0A6H5KRV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV0_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 5.930e-5
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    4 CGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINV 37
            CGH  C KRP++G  GSTK EFCSQHA +GM+NV
Sbjct:   37 CGHPGCIKRPSFGNDGSTKAEFCSQHAWKGMVNV 70          
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Match: A0A6H5KFP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP4_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 6.930e-5
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    3 QCGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRC 42
            +C +  CSKRPTYGV  S KRE CSQHA+  M+N++  RC
Sbjct:    6 KCLYSGCSKRPTYGVEASRKRECCSQHARPWMVNIDLTRC 45          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13081.2544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE7.340e-2747.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI4.190e-2241.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FY22_ECTSI1.240e-658.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KY67_9PHAE3.980e-656.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU8_ECTSI1.140e-560.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FLW1_ECTSI3.200e-561.54EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KRV0_9PHAE5.930e-567.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFP4_9PHAE6.930e-557.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13081contigH-canaliculatus_F_contig13081:1733..2737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13081.2544.1mRNA_H-canaliculatus_F_contig13081.2544.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13081 1733..2737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13081.2544.1 ID=prot_H-canaliculatus_F_contig13081.2544.1|Name=mRNA_H-canaliculatus_F_contig13081.2544.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=335bp
MSQCGHHSCSKRPTYGVAGSTKREFCSQHAKEGMINVNNKRCIQANCTTI
PSFAVAGSKKAEFCSQHAREGMIDVRSKRCSQRGCSTQPSSQQAPAAGGG
GSGNSSGKIPGSSCAQQQGNEGFGGLRSKRCGRHGCTLQATYVSSQGNER
AEFCAQHANDGILPAGIISGFGEYGIGGHAAGGAAAGVKRKQPSPPSPYA
LAMAGFSAGATGSAAATASSSGGSSSGTKRAALPTAPVMQFQPQVQPHSG
RYTSGSGDSLQFRHHPSQRYLAEGPQFPPQPHERYLGGGGSQFRAQSAER
YHIGGAGLTPVGAAGESGGYSDEIATVFDKEMPL*
back to top