prot_H-canaliculatus_F_contig13055.2528.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13055.2528.1
Unique Nameprot_H-canaliculatus_F_contig13055.2528.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length626
Homology
BLAST of mRNA_H-canaliculatus_F_contig13055.2528.1 vs. uniprot
Match: A0A6H5K9Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q4_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.710e-27
Identity = 350/643 (54.43%), Postives = 374/643 (58.16%), Query Frame = 0
Query:    1 VKRRSLPGVCARMACEVLHDAEAFLLAVAASTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVAGYGSHWFWGHLRRSPAVAEQLLDAVLAKVEALSHEIVATAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASGVAVSELCTALRGYCELVSLGRPAAAALVARRLQTAVTAPLNALESLLY--SHHPATVXXXXXXXXXXXXXXXXXGPSTTFAVERVAGGNTTIAIAGTGAAVWRLEEIVLCSILVSAGGVAVPDSGDXXXXXXXXXXXXXXXXXXXXSGSGDGAVGANAHEGARLCAAALRRLVVLCRSPAXXXXXXXXXXXXXXXXXXXXXXXXWLSCAGLYATLLLRGSRFDAMGELVGSVLGARANAPPPPLRGVEGTDALEALRDAALAASESEPEEXXXXTAXPPRQPPSPRAPLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAGGAEGGMPPLSLGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----GAGWFSEAALADCVKALP------APGADSGSGLAAMEREGTAG---TTVGAALGEA--TAWGGGRWWFGPVDCVEEALEQ 626
            VKRRSLPGVCA++ACEVL DA+ F+LAVAA+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AG  SHWFWGHLR+SPAV EQLLD VLA+VEALS E V                                      A+   V ELC ALR YCELV LGRPAA  L  R LQ A++AP +ALE++L   S  P   XXXXXXXXXXXXXXXXX                                                    XXXXXXXXXXXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXXXXX    AGLYA LLLRG+RF+A+  +V  VLG+      PPL G +G DAL+ALRDAALAASESE                 PR P   XXXXXXXXXXXXXXXXXX             S   G+E  +   ++GV  XXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXX     GAGWFSEAALADCVKALP      A  A   S LA    EG  G       AA G A   A GGGRW   PVDCVEEALEQ
Sbjct:  157 VKRRSLPGVCAKVACEVLCDADRFVLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGLNSHWFWGHLRKSPAVTEQLLDTVLARVEALSRETVGRGG----------------GAAAAACGDRIAGSTTAPATTAPVGELCAALRAYCELVGLGRPAA--LTERHLQAAMSAPTDALEAMLLLPSAAPGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLYAALLLRGARFEAVANVVSEVLGSTT----PPLTGPDGMDALDALRDAALAASESE----------------FPRPPXXXXXXXXXXXXXXXXXXXXXSPPVSPRGGPKLASARRGSEAPVAAGAVGVVPXXXXXXXXXXXXXRRRRGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGWFSEAALADCVKALPPSCSVVAAVAAPCSALAPSVSEGVEGEPPAVATAAWGGAIVAAGGGGRWRLCPVDCVEEALEQ 746          
BLAST of mRNA_H-canaliculatus_F_contig13055.2528.1 vs. uniprot
Match: D7FZF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF6_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.460e-18
Identity = 275/557 (49.37%), Postives = 293/557 (52.60%), Query Frame = 0
Query:   93 GVAGYGSHWFWGHLRRSPAVAEQLLDAVLAKVEALSHEIVATAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASGVAVSELCTALRGYCELVSLGRPAAAALVARRLQTAVTAPLNALESLLYSHHPATVXXXXXXXXXXXXXXXXXGPSTTFAVERVAGGNTTIAIAGTGAAVWRLEEIVLCSILVSAGGVAVPDSGDXXXXXXXXXXXXXXXXXXXXSGSGDGAVGANAHEGARLCAAALRRLVVLCRSPAXXXXXXXXXXXXXXXXXXXXXXXXWLSCAGLYATLLLRGSRFDAMGELVGSVLGARANAPPPPLRGVEGTDALEALRDAALAASESEPEEXXXXTAXPPRQPPSPRAPLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAGGAEGGMPPLSLG-----------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGWFSEAALADCVKALP------APGADSGSGLAAMEREGTAGTTVGAALGEATAWGG------GRWWFGPVDCVEEALEQ 626
            G AG  SHWFWGHLR+SPAV EQLLD VLAKVEAL+ E V     XXXXX                            A+   V EL  ALR YCELV LGRPAA  L  R LQ A++AP +ALE++L        XXXXXXXXXXXXXXXXX                                                    XXXXXXXXXXXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXXXXX    AGLYA LLLRG+RF+A+ ++V   LG+     PPPL G +G DAL+ALRDAALAASESE           PR P SPR            XXXXXXXXXXX             +   G+E  MPPLSL             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGWFSE ALADCVKALP         A  GS LA    EG  G     A               GRW   PVDCVEEALEQ
Sbjct:  458 GNAGLNSHWFWGHLRKSPAVTEQLLDTVLAKVEALARETVGXXXXXXXXXYSDRSAGSSTAP----------------ATTGTVGELSVALRAYCELVGLGRPAA--LTERHLQAAMSAPTDALEAVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLYAALLLRGARFEAVAKVVSGALGST----PPPLTGPDGMDALDALRDAALAASESEF----------PRPPSSPRP------SNNTAXXXXXXXXXXXSPPVSPRGGPKLTAARRGSEV-MPPLSLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGWFSEPALADCVKALPPSCSVPVAAAAPGSALAPTVSEGVEGEPPAVATAXXXXXXXXXXXXXGRWRLCPVDCVEEALEQ 964          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13055.2528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9Q4_9PHAE1.710e-2754.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZF6_ECTSI1.460e-1849.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13055contigH-canaliculatus_F_contig13055:670..2838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13055.2528.1mRNA_H-canaliculatus_F_contig13055.2528.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13055 670..2838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13055.2528.1 ID=prot_H-canaliculatus_F_contig13055.2528.1|Name=mRNA_H-canaliculatus_F_contig13055.2528.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=626bp
VKRRSLPGVCARMACEVLHDAEAFLLAVAASTASGEDDAHTAAAAAAAAA
AAATAGVLSKRGREGARRGGGGGGGYRDEENGGGGVGGGGGEGVAGYGSH
WFWGHLRRSPAVAEQLLDAVLAKVEALSHEIVATAATAAADAATSSGGGG
GGGQPGPTTTGAAAAAASASASGVAVSELCTALRGYCELVSLGRPAAAAL
VARRLQTAVTAPLNALESLLYSHHPATVAAAAAAAAAAAATAATTGPSTT
FAVERVAGGNTTIAIAGTGAAVWRLEEIVLCSILVSAGGVAVPDSGDGGA
AAAAGGGAKKHGGGGGGSGSGDGAVGANAHEGARLCAAALRRLVVLCRSP
APGGGGGAKMMDKAEKRGNGGGGGGWLSCAGLYATLLLRGSRFDAMGELV
GSVLGARANAPPPPLRGVEGTDALEALRDAALAASESEPEEEPRETAEPP
RQPPSPRAPLPASPRRPKSATPSSLMSSPSVSPRGGPASARRGSGAGGAE
GGMPPLSLGVGAASASSASRVRPRSWSSGSGGGGGGTETTAAAAAAAATA
AAAAAGGAGWFSEAALADCVKALPAPGADSGSGLAAMEREGTAGTTVGAA
LGEATAWGGGRWWFGPVDCVEEALEQ
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