prot_H-canaliculatus_F_contig13052.2525.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13052.2525.1
Unique Nameprot_H-canaliculatus_F_contig13052.2525.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length61
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13052.2525.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 4.100e-13
Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 0 
Query:    1 MRVPGAAVALVGSHVDQMTGEEAARASSDLHT---------------VATNFIQEKASNAARTQSVRCIDAEST 59
            MRVPGAAVALVGSHVDQM  E+A +A + LHT               V + FI++KA NA+R QS+RCIDAEST
Sbjct:  394 MRVPGAAVALVGSHVDQMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAEST 467
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13052.2525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKS5_ECTSI4.100e-1356.76LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13052contigH-canaliculatus_F_contig13052:39..528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13052.2525.1mRNA_H-canaliculatus_F_contig13052.2525.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13052 39..528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13052.2525.1 ID=prot_H-canaliculatus_F_contig13052.2525.1|Name=mRNA_H-canaliculatus_F_contig13052.2525.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=61bp
MRVPGAAVALVGSHVDQMTGEEAARASSDLHTVATNFIQEKASNAARTQS
VRCIDAESTTT
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