prot_H-canaliculatus_F_contig1303.2512.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1303.2512.1
Unique Nameprot_H-canaliculatus_F_contig1303.2512.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length266
Homology
BLAST of mRNA_H-canaliculatus_F_contig1303.2512.1 vs. uniprot
Match: D8LG66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG66_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 6.650e-107
Identity = 169/252 (67.06%), Postives = 193/252 (76.59%), Query Frame = 0
Query:   21 RSTAFTHVARTVSSPRTQQPHHELALAPLLRTISPISGIWSSQGREEE-------GSLVTEWSPSRRTRLFAQLDGMYPDGVPNLPGMKTIVETEEEEEQRAIREWKDDGRKGRVLVRRKEIPSPEIDAVSVCQLVLQSLQNNDDPMLDYGAAVAIKFASSKSAIKDMTPVEYGTFLRNHPEQVLLIDNASCAPAERAKVSPDGKQVLQKVEVVGRYPDNVKRILDVQLRKEEDECWRVDALTLGPPVASRK 265
            RS AF  VA    SP           +PLL   S +SG+  S GR          GS   +    R +RL A+ +G+YPDGVPNLPG+KTIVETEEEEEQRA+REW+DDGRKGRVLVRRKEIPSP +D  SVCQLV +SLQNNDDPMLDYGAAVA+KFASSKSA+++MTP EYG FLRN P+QVLL+DNASCAPAERAKVS DGKQVLQKVEVVGRYPD V+RI++VQL KEED+CWRVDA+T GP V  RK
Sbjct:   21 RSAAFVDVAPACFSPS----------SPLLARSS-VSGLPPSLGRSVSNDEGYPAGSSRWDGHSRRSSRLLAETNGIYPDGVPNLPGIKTIVETEEEEEQRAVREWQDDGRKGRVLVRRKEIPSPAMDPASVCQLVFESLQNNDDPMLDYGAAVAVKFASSKSAVRNMTPAEYGAFLRNDPDQVLLVDNASCAPAERAKVSADGKQVLQKVEVVGRYPDVVRRIVEVQLTKEEDDCWRVDAMTFGPNVEQRK 261          
BLAST of mRNA_H-canaliculatus_F_contig1303.2512.1 vs. uniprot
Match: A0A0G4G2B9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G2B9_9ALVE)

HSP 1 Score: 60.8 bits (146), Expect = 2.510e-7
Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 0
Query:  149 VLQSLQNNDDPMLDYGAAVAIKFASSKSAIKDMTPVEYGTFLRNHPEQVLLIDNASCAPAERAKVSPDGKQVLQKVEVVGRYPDNVKRILDVQLR-------KEEDECWRVDALTL 257
            V++ LQ NDDP LD+GAAV I+ ++  S ++++TP +YG FLR    + LL + A     E   ++ D  ++ Q V + G  P+          R       K+ED  WR+  + L
Sbjct:  131 VMEGLQVNDDPQLDHGAAVVIRHSAKGSILRNLTPSQYGRFLRRTRYKCLL-NFAEFDILEEPVLNEDKTELQQVVAIEGYLPNFQDYFARKHFRENVKFDMKKEDGHWRIRTMVL 245          
BLAST of mRNA_H-canaliculatus_F_contig1303.2512.1 vs. uniprot
Match: A0A835YJS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.250e-6
Identity = 44/158 (27.85%), Postives = 68/158 (43.04%), Query Frame = 0
Query:  140 IDAVSVCQLVLQSLQNNDDPMLDYGAAVAIKFA-------------------------------------SSKSAIKDMTPVEYGTFLRNHPEQVLLIDNASCAPAERAKVSPDGKQVLQKVEVVGRYPDNVKRILDVQLRK----EEDECWRVDALT 256
            +    VC  VL++LQ NDD    +GAA  +KFA                                     S  +A   +TP +YG +LR    +VLL +N+    +   +++  GK+ +Q+  VVG  P   K   D+QL +    E+ ECW +D +T
Sbjct:   17 VTMTQVCNKVLRALQLNDDLTHGHGAAAMVKFALQRAFPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXASPLNAAAALTPSQYGGYLRAGEFEVLL-ENSRFGLSGPLRMAESGKRCVQRATVVGPPPALTKFEFDIQLSRTDVPEKGECWLIDTVT 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1303.2512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG66_ECTSI6.650e-10767.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4G2B9_9ALVE2.510e-732.76Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A835YJS0_9STRA1.250e-627.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1303contigH-canaliculatus_F_contig1303:16490..20263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1303.2512.1mRNA_H-canaliculatus_F_contig1303.2512.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1303 15614..20487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1303.2512.1 ID=prot_H-canaliculatus_F_contig1303.2512.1|Name=mRNA_H-canaliculatus_F_contig1303.2512.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=266bp
MRVPRVSQVFPAAVVTASFSRSTAFTHVARTVSSPRTQQPHHELALAPLL
RTISPISGIWSSQGREEEGSLVTEWSPSRRTRLFAQLDGMYPDGVPNLPG
MKTIVETEEEEEQRAIREWKDDGRKGRVLVRRKEIPSPEIDAVSVCQLVL
QSLQNNDDPMLDYGAAVAIKFASSKSAIKDMTPVEYGTFLRNHPEQVLLI
DNASCAPAERAKVSPDGKQVLQKVEVVGRYPDNVKRILDVQLRKEEDECW
RVDALTLGPPVASRK*
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