prot_H-canaliculatus_F_contig13008.2501.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13008.2501.1
Unique Nameprot_H-canaliculatus_F_contig13008.2501.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length135
Homology
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.450e-47
Identity = 98/121 (80.99%), Postives = 101/121 (83.47%), Query Frame = 0
Query:   17 KSRAVEPVGGD--DDVDSLFGDDDXXXXXXXXXXXXXXXASRAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            KSRAVE  GGD  DDVDSLFGDD+                SRAEQMAAAK+AKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIR+TEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV
Sbjct:  704 KSRAVEVGGGDEGDDVDSLFGDDEAGEEGEAPASGAGM--SRAEQMAAAKSAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 822          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.660e-35
Identity = 86/124 (69.35%), Postives = 95/124 (76.61%), Query Frame = 0
Query:   12 APAAVKSRAVEPVGGDDDVDSLFGDDDXXXXXXXXXXXXXXXASRAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            AP   + +A +    DD+VD+LF        XXXXXXXXXXX SRA++MAAAK AKDA KK+DRSQIVFEVKPW+   DLK LF KI  TEIDGLVWGEAHKLVPVAFGVKKLVLSCVV D KV
Sbjct:   39 APVKQEKKAAKKPEADDEVDNLF-------DXXXXXXXXXXXESRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKV 155          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 4.580e-35
Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0
Query:   55 SRAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            SRAE+MA AKAAKDA KKVDRSQIVFEVKPW+   DLKGLF KI +T+I+GLVWGEAHKLVPVAFGVKKLVLSCVV D KV
Sbjct:  125 SRAEKMAEAKAAKDAKKKVDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKV 205          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A835ZFP2_9STRA (EF-1 guanine nucleotide exchange domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.030e-23
Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 0
Query:   55 SRAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIR-QTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            SRAEQMAAAKAAKD  KK++ S +V+EVKPWEA  DLK L++KI+ +  +DGL W E   L PVAFG+ KLV++C + D KV
Sbjct:   77 SRAEQMAAAKAAKDKKKKIEMSNVVYEVKPWEADQDLKALYEKIKKECAMDGLRWSEGCTLAPVAFGINKLVIACTIEDDKV 158          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.210e-22
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   56 RAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            RAE   A K  K+  K ++RSQ+V EVKPWEA  DL+ L  KI+Q E+DGL WGE HKLVPVAFG+KKL++ C+++D KV
Sbjct:  125 RAEAAKANK--KEKPKPIERSQVVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKV 202          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A6G0WMX9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMX9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.500e-22
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   56 RAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            RAE   A K  K+  K ++RSQ+V EVKPWEA  DL+ L  KI++ E+DGL WGE HKLVPVAFG+KKL++ C+++D KV
Sbjct:   85 RAEAAKANK--KEKPKPIERSQVVIEVKPWEAETDLEELAAKIKEVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKV 162          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A835Z3J2_9STRA (Lysine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.380e-22
Identity = 71/110 (64.55%), Postives = 83/110 (75.45%), Query Frame = 0
Query:   27 DDDVDSLFGDDDXXXXXXXXXXXXXXXASRAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIR-QTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            DDD+D +FGDDDXXXXXXXXXXXXXXX      MAAAKAAKD  KKV+RSQ+V EVKPW++  DLK L+ KI  +   DGLVW E   + PVAFG+ KLV+SCV+ D KV
Sbjct:  704 DDDIDDMFGDDDXXXXXXXXXXXXXXXXXXX--MAAAKAAKDKKKKVERSQVVLEVKPWDSETDLKALWAKIMAEVTADGLVWAEGFNIAPVAFGIMKLVISCVIEDEKV 811          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A485LAV1_9STRA (Aste57867_18076 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAV1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.770e-21
Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
Query:   56 RAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            RAE   A K  K+  K ++RSQ+V EVKPWEA  DL+ L  KI+  E+DGL WGE HKLVPVAFG+KKL++ C+++D KV
Sbjct:  125 RAEAAKANK--KEKPKPIERSQVVIEVKPWEAETDLEELAVKIKALEVDGLTWGEGHKLVPVAFGIKKLLVQCIIIDDKV 202          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A485L9S1_9STRA (Aste57867_18212 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9S1_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.290e-21
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 0
Query:   56 RAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            RAE   A K  K+  K ++RSQ+V EVKPWEA  DL+ L  +I+  EIDGL WGE HKLVPVAFG+KKL++ C++VD KV
Sbjct:   83 RAEAAKANK--KEKPKPIERSQVVIEVKPWEAETDLEELAAQIKALEIDGLSWGEGHKLVPVAFGIKKLLVQCIIVDDKV 160          
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Match: A0A067CDZ7_SAPPC (EF1_GNE domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CDZ7_SAPPC)

HSP 1 Score: 90.9 bits (224), Expect = 2.390e-20
Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   62 AAKAAK-DANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV 135
            AAKA+K +  K ++RSQ+V EVKPWEA  DL+ L  KI+  E++GL WGE+HKLVPVAFG+KKL++ C+++D  V
Sbjct:   77 AAKASKKEKAKPIERSQVVIEVKPWEAETDLEALAIKIKALEVNGLTWGESHKLVPVAFGIKKLLVQCIIIDELV 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13008.2501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM77_ECTSI2.450e-4780.99Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A6H5JFV9_9PHAE1.660e-3569.35EF1_GNE domain-containing protein n=3 Tax=Ectocarp... [more]
A0A6H5KBH2_9PHAE4.580e-3582.72EF1_GNE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZFP2_9STRA2.030e-2359.76EF-1 guanine nucleotide exchange domain-containing... [more]
A0A6G0WJF4_9STRA2.210e-2258.75EF1_GNE domain-containing protein n=1 Tax=Aphanomy... [more]
A0A6G0WMX9_9STRA2.500e-2257.50EF1_GNE domain-containing protein n=1 Tax=Aphanomy... [more]
A0A835Z3J2_9STRA5.380e-2264.55Lysine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A485LAV1_9STRA4.770e-2157.50Aste57867_18076 protein n=1 Tax=Aphanomyces stella... [more]
A0A485L9S1_9STRA5.290e-2158.75Aste57867_18212 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CDZ7_SAPPC2.390e-2057.33EF1_GNE domain-containing protein n=1 Tax=Saproleg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainSMARTSM00888EF1_GNE_2coord: 75..135
e-value: 0.0043
score: 8.7
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainPFAMPF00736EF1_GNEcoord: 78..135
e-value: 3.3E-18
score: 65.6
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 68..135
e-value: 1.3E-20
score: 75.1
NoneNo IPR availablePANTHERPTHR11595ELONGATION FACTOR 1-BETAcoord: 8..135
NoneNo IPR availablePANTHERPTHR11595:SF21ELONGATION FACTOR 1-BETAcoord: 8..135
IPR036219Translation elongation factor eEF-1beta-like superfamilySUPERFAMILY54984eEF-1beta-likecoord: 72..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13008contigH-canaliculatus_F_contig13008:2301..3012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13008.2501.1mRNA_H-canaliculatus_F_contig13008.2501.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13008 2301..3012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13008.2501.1 ID=prot_H-canaliculatus_F_contig13008.2501.1|Name=mRNA_H-canaliculatus_F_contig13008.2501.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=135bp
AAAVEKKGKKAAPAAVKSRAVEPVGGDDDVDSLFGDDDEEEAGAGAGAGA
AAPASRAEQMAAAKAAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRQ
TEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036219eEF-1beta-like_sf
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR014038EF1B_bsu/dsu_GNE