prot_H-canaliculatus_F_contig12940.2449.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12940.2449.1
Unique Nameprot_H-canaliculatus_F_contig12940.2449.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length344
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12940.2449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 111..133
e-value: 2.9
score: 16.9
coord: 81..105
e-value: 0.29
score: 20.2
coord: 25..50
e-value: 0.1
score: 21.7
coord: 139..163
e-value: 1.6
score: 17.7
coord: 56..80
e-value: 29.0
score: 9.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 58..80
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 141..163
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 139..168
score: 11.302
NoneNo IPR availableGENE3D3.30.160.60coord: 3..78
e-value: 3.4E-5
score: 25.7
NoneNo IPR availableGENE3D3.30.160.60coord: 141..172
e-value: 7.6E-8
score: 34.0
NoneNo IPR availableGENE3D3.30.160.60coord: 79..140
e-value: 3.2E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR46179FAMILY NOT NAMEDcoord: 61..171
coord: 6..75
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 124..164
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 82..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12940contigH-canaliculatus_F_contig12940:1052..2083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12940.2449.1mRNA_H-canaliculatus_F_contig12940.2449.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12940 1052..2083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12940.2449.1 ID=prot_H-canaliculatus_F_contig12940.2449.1|Name=mRNA_H-canaliculatus_F_contig12940.2449.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=344bp
GHCERLRKLRKRKNKITLDEAQRDFPCPFKDCNYKAYRADTLRTHEINEH
PYIPRFWCRICHNPFDTLQSLAVHINIEKHFACYFDGCPFTTRRLYHLER
HSRRHQNDRRFSCGTCPYKAFTASDMVVHESTHLINKPFACHVEWCKQSF
AQSNQLTMHKKTHTIEGQIRKKKQENRVNNKLKEWGFTVDCETIINAVAG
ECLKDAQRYFSRLDFRIVNCINAICILEVDEFQHYNYNLSCEASRMADVR
ASLVLAGYTLPIHWIRYSPCGKYKIGSNETKTPRPTREQVLKDHLAEVCS
PDYAPEKQERIHYLFYDLVSKSEGPEIMYDPDFPDAMKNLVSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type