prot_H-canaliculatus_F_contig12931.2443.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12931.2443.1
Unique Nameprot_H-canaliculatus_F_contig12931.2443.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length72
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12931.2443.1 vs. uniprot
Match: A0A6H5KD93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD93_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.480e-34
Identity = 62/72 (86.11%), Postives = 67/72 (93.06%), Query Frame = 0 
Query:    1 RFCQDCKYNVVQAHDILMGKIDLEGSENEEEYDEDIFLPFEDRVFEGESGNSEDKVLICDVLDVEDLIYSHE 72
            +FC DCKYNVVQAHDILMGKI LEGS+NEEEYDE+IFLP EDRVFEGESG SEDK+LICDV+DVEDLIY HE
Sbjct:  181 KFCPDCKYNVVQAHDILMGKIGLEGSDNEEEYDEEIFLPIEDRVFEGESGTSEDKMLICDVMDVEDLIYFHE 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12931.2443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD93_9PHAE2.480e-3486.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12931contigH-canaliculatus_F_contig12931:2486..3368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12931.2443.1mRNA_H-canaliculatus_F_contig12931.2443.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12931 2486..3368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12931.2443.1 ID=prot_H-canaliculatus_F_contig12931.2443.1|Name=mRNA_H-canaliculatus_F_contig12931.2443.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=72bp
RFCQDCKYNVVQAHDILMGKIDLEGSENEEEYDEDIFLPFEDRVFEGESG
NSEDKVLICDVLDVEDLIYSHE
back to top