prot_H-canaliculatus_F_contig1293.2439.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1293.2439.1
Unique Nameprot_H-canaliculatus_F_contig1293.2439.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length435
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1293.2439.1 vs. uniprot
Match: D8LFW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW7_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.700e-9
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0 
Query:  374 PELTIPEPDELDQTEPGGGXXXXXXXXXXGKGEWVHFYNRDGEKWWRNTVTDERLKYNP 432
            P +  PE D LD  EPGGG          G G WVH+YNRDG+KWWRNTVT +RL ++P
Sbjct:  222 PAMLPPETDMLDVKEPGGGGGDL------GGGPWVHYYNRDGDKWWRNTVTGQRLNHDP 274
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BLAST of mRNA_H-canaliculatus_F_contig1293.2439.1 vs. uniprot
Match: A0A6H5JT46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT46_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 7.300e-8
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0 
Query:  374 PELTIPEPDELDQTEPGGGXXXXXXXXXXGKGEWVHFYNRDGEKWWRNTVTDERLKYNP 432
            P +  PE D LD  EPGGG          G   WVH+YNRDG+KWWRNTVT +RL ++P
Sbjct:  377 PAMLPPEADMLDVKEPGGGGGDL------GGRHWVHYYNRDGDKWWRNTVTGQRLNHDP 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1293.2439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFW7_ECTSI3.700e-954.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT46_9PHAE7.300e-852.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 231..253
NoneNo IPR availableTMHMMTMhelixcoord: 134..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1293contigH-canaliculatus_F_contig1293:675..2111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1293.2439.1mRNA_H-canaliculatus_F_contig1293.2439.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1293 675..2111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1293.2439.1 ID=prot_H-canaliculatus_F_contig1293.2439.1|Name=mRNA_H-canaliculatus_F_contig1293.2439.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=435bp
HNPVTNEWTYGGSSVGQPQMMGYDYASPASPGVMYAWPGATPGMMPLYPQ
SPQQHAGSYIYGGAAPGMMMPDVPFGVDPAQQQQMMYMQQVQQMQQMQQQ
QQQQQEMMMAGYQPGYDDASGGGMFGGPAYMAAAAGAGAAAGAGFAGMAG
GFVPTMPDPNGPDAHLLVGALRSKDGTKPYPKSHKARGSVSGAMPFDPTS
MAPAWMGGAAAGVASGTAGAAVVGDAVAAEGGAAAVGAGVPGGFPGFFGG
VVPNSFMPNGFMPNGFMPDGMAVPAGLAGKKEGKKSKDKKKDEGEKESEK
KEGDGGGDGDGDGGGDGGGDGGGEGGGDGGREGGDGEDDGDGEDIVKEVV
DASAAAAAAASGIAASVARSAHSPELTIPEPDELDQTEPGGGGGEGADGS
GGGKGEWVHFYNRDGEKWWRNTVTDERLKYNPSK*
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