prot_H-canaliculatus_F_contig1289.2407.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1289.2407.1
Unique Nameprot_H-canaliculatus_F_contig1289.2407.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length227
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1289.2407.1 vs. uniprot
Match: D7FKA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKA4_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 9.000e-76
Identity = 137/232 (59.05%), Postives = 164/232 (70.69%), Query Frame = 0 
Query:    1 MSWAEGRTASMPSGATDDRREALDRVDGLLRALAQDKNLQDDLKHKDVRKALHHWTGEERLSQDEADELMEDNYRVQSVCSRMVELQRLCKQASIGLPLPRVLAGIGLYEQLGEAAVAAPSARINSGQAEATNSQRRRKAPQPEASSKDQGEGAPQMAGEGASGG-----GGRENEPSWRQALIDEVLRLAGVCVCALVFTLLLKRYRGDDPLGKGL-AENQEASSAGQDEL 226
            MSWAEGR A+MP+GAT  R+EALDRVDG+LRALA+DK LQDDL++ DV++AL HWTG+ R+SQD ADELMEDNYR+QSVCSRM ELQ LCKQASIGLPL  VLAG GLY+ L +   A+ +A   SG      + R        +S   + +GA       A+ G     G  E+EPSWR+AL +E LRL  VC+CALVFTLLLK YRGDDPLGKGL  + Q   SAG+ EL
Sbjct:    1 MSWAEGREAAMPAGATGSRQEALDRVDGMLRALARDKLLQDDLRNTDVKRALEHWTGQNRMSQDHADELMEDNYRIQSVCSRMAELQSLCKQASIGLPLSHVLAGKGLYDNLDQPGQASAAATSGSGGNAVDQTGRPTSTSDGSSSGLQRRKGATAKGLHDATAGAEVGTGKEEDEPSWRRALAEEALRLTFVCLCALVFTLLLKHYRGDDPLGKGLPGQQQTPPSAGEGEL 232
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BLAST of mRNA_H-canaliculatus_F_contig1289.2407.1 vs. uniprot
Match: A0A2R5G976_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G976_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.110e-15
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 0 
Query:   23 LDRVDGLLRALAQDKNLQDDLKHKDVRKALHHWTGEERLSQDEADELMEDNYRVQSVCSRMVELQRLCKQASIGLPLPRVLAG 105
            ++RV G+L AL +DKNLQ+DL+ KDV  A+ HWTG  RLS +EA    E+N RV+ V S++  LQ   + A IG+P+  +LAG
Sbjct:    1 MERVKGVLEALQKDKNLQEDLRDKDVLAAIDHWTGRNRLSTEEASRRFEENGRVRQVMSKLQRLQAESQAAGIGVPIMALLAG 83
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1289.2407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKA4_ECTSI9.000e-7659.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5G976_9STRA8.110e-1549.40Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1289contigH-canaliculatus_F_contig1289:4919..8346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1289.2407.1mRNA_H-canaliculatus_F_contig1289.2407.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1289 4919..8346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1289.2407.1 ID=prot_H-canaliculatus_F_contig1289.2407.1|Name=mRNA_H-canaliculatus_F_contig1289.2407.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=227bp
MSWAEGRTASMPSGATDDRREALDRVDGLLRALAQDKNLQDDLKHKDVRK
ALHHWTGEERLSQDEADELMEDNYRVQSVCSRMVELQRLCKQASIGLPLP
RVLAGIGLYEQLGEAAVAAPSARINSGQAEATNSQRRRKAPQPEASSKDQ
GEGAPQMAGEGASGGGGRENEPSWRQALIDEVLRLAGVCVCALVFTLLLK
RYRGDDPLGKGLAENQEASSAGQDEL*
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