prot_H-canaliculatus_F_contig1285.2378.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1285.2378.1
Unique Nameprot_H-canaliculatus_F_contig1285.2378.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length470
Homology
BLAST of mRNA_H-canaliculatus_F_contig1285.2378.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 1.350e-55
Identity = 180/474 (37.97%), Postives = 199/474 (41.98%), Query Frame = 0
Query:    1 MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVCAGALHYNADGRQLLAASCAGGRVSVWAVDFDEGVPLPSRSQQPQQKETGSAFDPGAAALVSASPAPTPTAALASAVSTAGSKPGTPAESVFCSAHAGSIPQHFHKQSAPSRSSSKNRSEEQASREEDAHDRGSKLATGSRQRDEESISGGNTSSPTFQVLGRQLFLLPTAAEEKEPHPRLKSPVAAAIEAPATSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAA-TDDAVASVSSSGRHRSIGTSISETLVITAHPGRGGCGVGEAGATDDRPDGGVGSSRGSKQHRAIEGAWVEPAPGKKDGSS-GLDRGRGVAAALGVVAAGDRHRLGDERHTAANNRD--SEHKWHKRVTGLFAGAEEALDDTKTKHRRLDTGDSGCGRDGRGRSWEIGAAEGKEAEVERTDEKKTPTGEANQFLGAAGLFTVNPW 470
            MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKV AGALHYNADG+Q    S    R + +    D G    SR  +P  ++  S  D G+                                   C                                                              P FQVLGRQ+ LLPTAAEEK    R  SP+      P                                   XXXXX    TDDAVASV+ S RHRS+GTSIS+TLVI           G A   DDR         G ++HR    AW EPAPGK DG + G D GRGVAAALGVVAAGDRHRLG ER           E KWHKRV G FAG E   DD K   RR D+G  G G   RG+          E E  R ++       A    G    FTVNPW
Sbjct:  251 MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQQQSRPS----RGNTFPASRD-GQRSHSRDSKPTMEKEASGGDDGSXXX-------------------------------XCX-----------------------------------------------------XXXXXAGMPAFQVLGRQVVLLPTAAEEKV---RSSSPLGGPAATPXXXXSGVTVGGPSSAVGGRLQNRHAARAEAVAATVXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIADG--------GTADQADDRA--------GGREHRPA--AWSEPAPGKDDGGNYGRDSGRGVAAALGVVAAGDRHRLGGERRXXXXXXXXXDECKWHKRVAGAFAGVEGTADDEKGVERRGDSGGDGSGGKNRGKRT------ADEKEARREEDGTDRAANAGVSSGVTPRFTVNPW 608          
BLAST of mRNA_H-canaliculatus_F_contig1285.2378.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.190e-52
Identity = 203/493 (41.18%), Postives = 237/493 (48.07%), Query Frame = 0
Query:    1 MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVCAGALHYNADGRQ---LLAASCAGGRVSVWAVDFDEGVPLPSRSQQPQQKETGSAFDPGAAALVSASPAPTPTAALASAVSTAGSKPGTPAESVFCSAHAGSIPQHFHKQSAPSRSSSKNRSEEQASRE-EDAHDRGSKLATGSRQRDEESISGGNTSS--------------PTFQVLGRQLFLLPTAAEEKEPHPRLKSPVAAAIEAPATSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAA-TDDAVASVSSSGRHRSIGTSISETLVITAHPGRGGCGVGEAGATDDRPDGGVGSSRGSKQHRAIEGAWVEPAPGKKDGSSGL-DRGRGVAAALGVVAAGDRHRL-GDERHTAANNRDSEHKWHKRVTGLFAGAEEALDDTKTKHRRLDTGDSGCGRDGRGRSWEIGAAEGKEAEVERTDEKKTPTGEANQFL--GAAGLFTVNPW 470
            MYCASPSGLRRWSWDN  ASA+LEAMGDVPWGKV AGALHYNADG+Q   L AAS             +   PL + ++      T S  DP                     +ST   + G     V               +S PSR ++       ASR+ + +H R SK         E+  SGG+  S              P FQVLGRQ+ LLPTAAEEK    +  SP            XXXX                        XXXXXXXX    TDDAVASV+ S RHRS+GTSIS+TLVI       GC   +A   DDR         G ++HR    AW EPAPGK DG + + D GRGVAAALGVVAAGDRHRL G+ R T   +   E KWHKRV G FAG E   DD K   RR D+G  G G   RG+    G A+ KEA  E     +     AN  +  G     TV+PW
Sbjct:  230 MYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQQGRNLGAAS-------------ESSAPLDTPARGATTTATESPSDPS--------------------LSTTDREYGDADAKV--------------PESRPSRGNTF-----PASRDGQRSHSRDSKPTM------EKEASGGDDGSXXXXXXXXXXXXXMPAFQVLGRQVVLLPTAAEEKA---KPSSPXXXXXXXXXXXXXXXXVGGPASAGGGRIQNRHAARAEAVAXXXXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIAD-----GCTADQA---DDRA--------GGREHRPA--AWSEPAPGKDDGGNYVRDCGRGVAAALGVVAAGDRHRLSGERRATGGADDGDECKWHKRVAGAFAGVEGTADDEKGMERRDDSGGDGSGGKTRGK----GNADEKEARREGDGTDRA----ANVGVPSGVTSRMTVDPW 635          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1285.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ17_ECTSI1.350e-5537.97Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A6H5K3J5_9PHAE1.190e-5241.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1285contigH-canaliculatus_F_contig1285:25949..28210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1285.2378.1mRNA_H-canaliculatus_F_contig1285.2378.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1285 25918..28210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1285.2378.1 ID=prot_H-canaliculatus_F_contig1285.2378.1|Name=mRNA_H-canaliculatus_F_contig1285.2378.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=470bp
MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVCAGALHYNADGRQLLA
ASCAGGRVSVWAVDFDEGVPLPSRSQQPQQKETGSAFDPGAAALVSASPA
PTPTAALASAVSTAGSKPGTPAESVFCSAHAGSIPQHFHKQSAPSRSSSK
NRSEEQASREEDAHDRGSKLATGSRQRDEESISGGNTSSPTFQVLGRQLF
LLPTAAEEKEPHPRLKSPVAAAIEAPATSLSTVSASGRGGGAGASRNRRS
SRAEAVAAAVAAVASAKAATDDAVASVSSSGRHRSIGTSISETLVITAHP
GRGGCGVGEAGATDDRPDGGVGSSRGSKQHRAIEGAWVEPAPGKKDGSSG
LDRGRGVAAALGVVAAGDRHRLGDERHTAANNRDSEHKWHKRVTGLFAGA
EEALDDTKTKHRRLDTGDSGCGRDGRGRSWEIGAAEGKEAEVERTDEKKT
PTGEANQFLGAAGLFTVNPW
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