prot_H-canaliculatus_F_contig12840.2370.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12840.2370.1
Unique Name	prot_H-canaliculatus_F_contig12840.2370.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	224

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A6H5KET6_9PHAE (UV excision repair protein RAD23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KET6_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.250e-38
Identity = 153/242 (63.22%), Postives = 171/242 (70.66%), Query Frame = 0

Query:    1 MSDVKAKIAEVRGDDPASQVLISSGKTLKDGDALSSSVAASGFVVLMVKVRGKNDSHTGTTPPAASSTPAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----MGSDPASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTG-------------EGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFDQV 224
            MSDVKAKIAEVRG DPA+QVLI  GKTLKDGD+L+ SVAA GF+VLMVK R    ++   TP A        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +  DP +V+MLTAMGFP DQA AALRAA+NDVSRAASYLMEGIP + GAG    GGD+                      E    AA LA+ALM M+ G+G  NPLNF+RFHPQFD++
Sbjct:   25 MSDVKAKIAEVRGHDPATQVLICGGKTLKDGDSLADSVAAGGFLVLMVKRRANPVANAAPTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGANETLSVDPTNVDMLTAMGFPADQATAALRAAFNDVSRAASYLMEGIPHNAGAG--TGGGDARXXXXXXXXXXXXXXXXXXXXXEXXXXAAGLAQALMGMEAGEG--NPLNFMRFHPQFDEL 262

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.440e-7
Identity = 40/98 (40.82%), Postives = 51/98 (52.04%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFD 222
            A+V+ L  MGFPEDQ ++ALRAA+N+  RA  YLM GIP+             A+A A       +G A  + A      G  + N L  LR HPQFD
Sbjct:  160 ATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQ------------AVAPAQTAAPSAEGGAGASAATATAVTGD-EANTLEALRNHPQFD 244

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A3M6VGI6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.440e-7
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQG-NPLNFLRFHPQFD 222
            A+V+ L  MGFPEDQ ++ALRAA+N+  RA  YLM GIPD + A            AA + G G         A+  + GG  +  N L  LR HPQFD
Sbjct:  159 ATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPDQVAA--------PLQTAATLAGAG---------AVAGIGGGGDETTNTLEALRNHPQFD 240

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A836CLA0_9STRA (UV excision repair protein RAD23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.410e-6
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0

Query:  133 MGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAP---------GGDSALAAA-MMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQF 221
            MGFPEDQ +AAL+AA+N++  AA+YLM G+PD      +A          GG   +  A +++G  GD   D A+ +   QG +G  NPL  LR+HPQF
Sbjct:    1 MGFPEDQVRAALQAAFNNLEVAANYLMTGLPDFAAPDFEAHQPNIETSGVGGTVGIVPADILSGPMGDTLGD-ADDMEAAQGFEGGANPLAALRYHPQF 98

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A8J5M654_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M654_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.180e-6
Identity = 41/98 (41.84%), Postives = 50/98 (51.02%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFD 222
            A+V+ L  MGFPEDQ ++ALRAA+N+  RA  YLM GIP+   A         A  AA   G    GA ++A             N L  LR HPQFD
Sbjct:   75 AAVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAAA--------PAQTAAPSAGAPSAGAEEVA-------------NSLEALRNHPQFD 151

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 2.440e-6
Identity = 87/223 (39.01%), Postives = 108/223 (48.43%), Query Frame = 0

Query:    2 SDVKAKIAEVRGDDPA-SQVLISSGKTLKDGDALSS-SVAASGFVVLMVKVRGKNDSHTGTTPPAASSTPAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGSDPASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFD 222
            ++VK  IAE R D PA +Q LI +GK LKD   L+  ++ A+ F+V M K +             A ++PA  XXXX XXXXXXX      XXX XXXXXXXX                    +P +V+ L  MGFPEDQ KAALRAA  +   A  +LM GIP+ L     A G  S  AAA                        G G+PL+ LR HPQ +
Sbjct:   24 AEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCMSKPK-----------KPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAAST----------------------GTGHPLDALRRHPQLN 213

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A662XTK5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTK5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.350e-6
Identity = 41/98 (41.84%), Postives = 49/98 (50.00%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFD 222
            A+V+ L  MGFPEDQ ++ALRAA+N+  RA  YLM GIP+   A   A       A A  TG G               G +   N L  LR HPQFD
Sbjct:  174 ATVQQLCDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQATAPPPA-------ATAPSTGAG---------------GAEDPNNSLEALRNHPQFD 249

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.940e-6
Identity = 40/98 (40.82%), Postives = 50/98 (51.02%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFD 222
            A+V+ L  MGFPEDQ + AL+AA+N+  RA  YLM GIP+ +     AP   +A AAA + G                    G  N L  LR HPQFD
Sbjct:  151 ATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETV-----AP--PAATAAAPLAG--------------------GAANSLEALRNHPQFD 221

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A2D4BJR4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJR4_PYTIN)

HSP 1 Score: 56.6 bits (135), Expect = 1.050e-5
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAP 173
            A+V+ L  MGFPEDQ +AALRAA+N+  RA  YLM GIP+   A   AP
Sbjct:  461 ATVQQLCDMGFPEDQVRAALRAAFNNADRAVEYLMNGIPEQASAPAPAP 509

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BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Match: A0A067D6B3_SAPPC (UV excision repair protein Rad23 n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D6B3_SAPPC)

HSP 1 Score: 56.2 bits (134), Expect = 1.060e-5
Identity = 40/98 (40.82%), Postives = 48/98 (48.98%), Query Frame = 0

Query:  125 ASVEMLTAMGFPEDQAKAALRAAYNDVSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALMEMQGGQGQGNPLNFLRFHPQFD 222
            A+++ L  MGFPEDQ + AL+AA+N+  RA  YLM GIPD        P G +  AAA               A     GG    N L  LR HPQFD
Sbjct:  142 ATIQQLCDMGFPEDQVRLALQAAFNNPDRAVEYLMNGIPDTR----QIPVGGAPAAAA--------------PAAPSAAGGLAGTNSLEALRNHPQFD 221

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12840.2370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 22


Match Name	E-value	Identity	Description
A0A6H5KET6_9PHAE	1.250e-38	63.22	UV excision repair protein RAD23 n=2 Tax=Ectocarpu...	[more]
A0A225X0I0_9STRA	7.440e-7	40.82	UV excision repair protein RAD23 n=13 Tax=Phytopht...	[more]
A0A3M6VGI6_9STRA	7.440e-7	42.42	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A836CLA0_9STRA	1.410e-6	42.42	UV excision repair protein RAD23 n=1 Tax=Tribonema...	[more]
A0A8J5M654_9STRA	2.180e-6	41.84	Uncharacterized protein n=1 Tax=Phytophthora aleat...	[more]
A0A7S4DGQ1_HETAK	2.440e-6	39.01	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A662XTK5_9STRA	3.350e-6	41.84	Uncharacterized protein n=1 Tax=Nothophytophthora ...	[more]
A0A5D6YB40_9STRA	7.940e-6	40.82	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A2D4BJR4_PYTIN	1.050e-5	57.14	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
A0A067D6B3_SAPPC	1.060e-5	40.82	UV excision repair protein Rad23 n=1 Tax=Saprolegn...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 123..160 e-value: 4.1E-10 score: 49.6
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 123..158 e-value: 1.4E-11 score: 44.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 121..161 score: 13.342
None	No IPR available	GENE3D	1.10.8.10		coord: 122..164 e-value: 2.9E-15 score: 57.8
None	No IPR available	GENE3D	3.10.20.90		coord: 1..67 e-value: 1.8E-6 score: 29.4
None	No IPR available	PANTHER	PTHR10621:SF0	AT15685P-RELATED	coord: 3..191
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 3..191
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..48 score: 9.286
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 2..59
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 121..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12840	contig	H-canaliculatus_F_contig12840:511..3238 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12840.2370.1	mRNA_H-canaliculatus_F_contig12840.2370.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12840 511..3238 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12840.2370.1 ID=prot_H-canaliculatus_F_contig12840.2370.1|Name=mRNA_H-canaliculatus_F_contig12840.2370.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=224bp
MSDVKAKIAEVRGDDPASQVLISSGKTLKDGDALSSSVAASGFVVLMVKV
RGKNDSHTGTTPPAASSTPAAGATAAAAAAAAAPAPVPASTTAAAASPAA
APAAAAAAAGAGAGGGGEGMGSDPASVEMLTAMGFPEDQAKAALRAAYND
VSRAASYLMEGIPDDLGAGDDAPGGDSALAAAMMTGEGGDGAADLAEALM
EMQGGQGQGNPLNFLRFHPQFDQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009060	UBA-like_sf
IPR029071	Ubiquitin-like_domsf
IPR000626	Ubiquitin_dom
IPR015940	UBA