prot_H-canaliculatus_F_contig12783.2314.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12783.2314.1
Unique Nameprot_H-canaliculatus_F_contig12783.2314.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length223
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12783.2314.1 vs. uniprot
Match: D7FR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR26_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 5.460e-60
Identity = 143/233 (61.37%), Postives = 164/233 (70.39%), Query Frame = 0 
Query:    1 GKGLERHLPPKDRNAALNAMKPFLRESNWDAAVLFALDEIHGRLEKNLRKATGEDGGSKGSALSSLGRGWEDIKRRAAEGWGXXXXXXXXXXXXXXXXXF-------FDELFGSDSQDFSPVG--LLTLSLLFG-AMARSSLQRRRYGRFEAKLAAIEAQRAMVPPSSPNAGDWPSERNPLSSPEPCPICLDVFTPAGSADGGGSASASGGLVGADGLPAATA-DCGHTFCRR 222
            GKGLER+LPP+DRNAALNAMKP LRE +WD AV+ AL+EIHGRL  NL KA G         LSSLG GWED+KR A++GWG  XXXXXXXXXXXXXXXF       F+  F        P G  LL LSLL+G A AR+SLQRRRY RFEAKLA IEAQRAM+P S+   G W   ++ L+S   CPICLD F+ A  ADG G+ +   GLVGADG+PAAT  DCGHTFC+R
Sbjct:   74 GKGLERYLPPRDRNAALNAMKPLLREGDWDGAVVLALEEIHGRLVGNLAKAAGGXXXXXXXXLSSLGWGWEDLKRWASDGWGGSXXXXXXXXXXXXXXXFRGFHLGGFENFFRESWNVDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSAAGGG-WLVGQDALASRGVCPICLDAFSEA--ADGSGADTK--GLVGADGMPAATLPDCGHTFCQR 301
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BLAST of mRNA_H-canaliculatus_F_contig12783.2314.1 vs. uniprot
Match: A0A6H5JG24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG24_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 2.900e-59
Identity = 146/237 (61.60%), Postives = 168/237 (70.89%), Query Frame = 0 
Query:    1 GKGLERHLPPKDRNAALNAMKPFLRESNWDAAVLFALDEIHGRLEKNLRKATGEDGGSKGSALSSLGRGWEDIKRRAAEGWGXXXXXXXXXXXXXXXXXF-----------FDELFGSDSQDFSPVG--LLTLSLLFG-AMARSSLQRRRYGRFEAKLAAIEAQRAMVPPSSPNAGDWPSERNPLSSPEPCPICLDVFTPAGSADGGGSASASGGLVGADGLPAATA-DCGHTFCRR 222
            GKGLER+LPP+DRNAALNAMKP LRE +WD AVL  L+EIH RL +NL KA G   G  G ALSSLG GWED+KRRA+ GW XXXXXXXXXXXXXXXXX            F+  FG + +   P G  LL LSLL+G A AR+SLQRRRY RFEAKLA IEAQRAM+P S+   G W   ++ L+S   CPICLD F+ A  ADG G+ +   GLVGAD +PAAT  DCGHTFC+R
Sbjct:   73 GKGLERYLPPRDRNAALNAMKPLLREGDWDGAVLLGLEEIHRRLFENLAKAAGGGDGGAG-ALSSLGWGWEDLKRRASGGWXXXXXXXXXXXXXXXXXXXXXXFRGFHLGGFENSFGENWKLDVPPGSVLLALSLLWGGATARASLQRRRYDRFEAKLAGIEAQRAMLPLSA--GGGWSVGQDALASRGVCPICLDAFSEA--ADGSGADTK--GLVGADRMPAATLPDCGHTFCQR 302
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12783.2314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR26_ECTSI5.460e-6061.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG24_9PHAE2.900e-5961.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 177..221
e-value: 5.8E-6
score: 26.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12783contigH-canaliculatus_F_contig12783:1311..3247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12783.2314.1mRNA_H-canaliculatus_F_contig12783.2314.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12783 1311..3247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12783.2314.1 ID=prot_H-canaliculatus_F_contig12783.2314.1|Name=mRNA_H-canaliculatus_F_contig12783.2314.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=223bp
GKGLERHLPPKDRNAALNAMKPFLRESNWDAAVLFALDEIHGRLEKNLRK
ATGEDGGSKGSALSSLGRGWEDIKRRAAEGWGGGGGGGGGGGGGMFGGGF
FDELFGSDSQDFSPVGLLTLSLLFGAMARSSLQRRRYGRFEAKLAAIEAQ
RAMVPPSSPNAGDWPSERNPLSSPEPCPICLDVFTPAGSADGGGSASASG
GLVGADGLPAATADCGHTFCRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027370Znf-RING_LisH