prot_H-canaliculatus_F_contig12740.2288.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12740.2288.1
Unique Nameprot_H-canaliculatus_F_contig12740.2288.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length118
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12740.2288.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 7.200e-7
Identity = 61/145 (42.07%), Postives = 67/145 (46.21%), Query Frame = 0 
Query:    1 SRSNLGVENGISRAHEISSQAAAAATLAAEVGGYKVATLPPTHSGAIGGEVRAAAPAXXXXXXXXXXXXXNGT-------------------DVAAAQALAEGGSYGGESSSS-----------EGDMTWEDFLATTDEGVGDPA 115
            SRS L V+N  SR  EISSQAAAAA  AAE GGY VA LPP +S   G            XXXXX     NGT                   ++ AA A       GG                EGDMTWEDFLATTD+ +GD A
Sbjct:   61 SRSTLSVDNRASRTQEISSQAAAAAVFAAEAGGYNVAGLPPAYSSGAGRNXXXXX-----XXXXXSTTYTNGTSSSLELSVNSGPGGRTIPREMVAAGADEAFDPAGGXXXXXXXXXXXXXXXXEGDMTWEDFLATTDD-LGDSA 199
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BLAST of mRNA_H-canaliculatus_F_contig12740.2288.1 vs. uniprot
Match: A0A6H5KT18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT18_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 5.580e-5
Identity = 49/120 (40.83%), Postives = 58/120 (48.33%), Query Frame = 0 
Query:   19 SQAAAAATLAAEVGGYKVATLPPTHSGAIGGEV------RAAAPAXXXXXXXXXXXXXNG--------TDVAAAQA-----LAEGGSYG------GESSSSEGDMTWEDFLATTDEGVGD 113
            SQAAAAA  AAE GGY +A LPP +S   GG        R ++ A             N          ++ AA A      A GG+ G      G  SSSEGDMTW +FLATTDE +GD
Sbjct:   11 SQAAAAAVFAAEAGGYSIAGLPPAYSVGAGGNGGGAHHRRISSTAYTNGTSSSLELSVNSGPGGRSIPREMVAAGADEAFDPARGGTGGEDADDGGNDSSSEGDMTWAEFLATTDE-LGD 129
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12740.2288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMA1_ECTSI7.200e-742.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT18_9PHAE5.580e-540.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12740contigH-canaliculatus_F_contig12740:1399..2944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12740.2288.1mRNA_H-canaliculatus_F_contig12740.2288.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12740 1398..2944 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12740.2288.1 ID=prot_H-canaliculatus_F_contig12740.2288.1|Name=mRNA_H-canaliculatus_F_contig12740.2288.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=118bp
SRSNLGVENGISRAHEISSQAAAAATLAAEVGGYKVATLPPTHSGAIGGE
VRAAAPAGGSDHHRRLSSSANGTDVAAAQALAEGGSYGGESSSSEGDMTW
EDFLATTDEGVGDPAPVT
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