prot_H-canaliculatus_F_contig12657.2221.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12657.2221.1
Unique Nameprot_H-canaliculatus_F_contig12657.2221.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length461
Homology
BLAST of mRNA_H-canaliculatus_F_contig12657.2221.1 vs. uniprot
Match: A0A6H5KLY0_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY0_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 9.170e-188
Identity = 380/484 (78.51%), Postives = 398/484 (82.23%), Query Frame = 0
Query:    1 QGVKDVLVVIYYIFRADYLSHVMERLKARPESWQALEVTLLAVTLVSKEIRDWMDAHARSKDAEQAEDASRTHALVSALVNELLVNARLSSVPLVLAAGCKLVGSFATLVGGGRYGRRRFGSIGNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------------------------LGGNSDPSLLPRALSYLSAGLQQSTSRDRAAISVRTVAASCERAIVTNPAALEALLQTLDVATRAGADVEERLTLMEASVRVLPAVDPSRASALLMGLLSPLMHTLAQGLQSTAPDEQAISETLQLLAQAVRFLDVRDTPPAPPPGSQXXXXXTGTRSPPVGPGQPGSXXXXXXXXXXXXXXXXGDGGHAPQHISTEFVRALWPMLEAVPRRMGASPEVIRQLFLLVGKLLTSLRMELAQQVHIPTLLKMIMDSYDERQYPCCLDVMTTAVEVYGAADEAVEPFRALLGRASTRTFTAVQ 460
            QGVKDVL+VIYYI RADYLSHVMERLKARPESWQALEVTLLAVTLVSKEIRDWMDAHARSKD E+AEDA RTHALVSAL+NELLVNA LSSVPLVLAAGCKLVGSFATLVGGGRYGR RFGS+G    XXXXXXXXXXX  XXXXXXXXXXXXXXXXXX                         LGG+SDPSLLPRAL YL+ GLQQ+ +RDRAAISVRTVAASCERAIV NPAALEALLQTL+VATRAGA +EERLTL+EASVRVLPAVDP+R S LLMGLLSPLMH LAQGLQST PDE AISE LQ LAQAVRFLDVRDTP        XXXXX               XXXXXXXXXXXXXXXX     + QHISTE VR LWPMLEAVP RMG SPEV+RQLFLLVGKLLTSLRM LA+QVHIPTLLKMIMDSYDE QYPCCLD+MTTAVEVYG+ DEA+E FRALLGRASTRTFT VQ
Sbjct:  483 QGVKDVLMVIYYILRADYLSHVMERLKARPESWQALEVTLLAVTLVSKEIRDWMDAHARSKDEERAEDAGRTHALVSALINELLVNASLSSVPLVLAAGCKLVGSFATLVGGGRYGRPRFGSVGGXXXXXXXXXXXXXXATXXXXXXXXXXXXXXXXXXXXXXXXXPPLSAEEETERGWWRRGRLGGSSDPSLLPRALGYLTVGLQQAEARDRAAISVRTVAASCERAIVNNPAALEALLQTLEVATRAGAGIEERLTLIEASVRVLPAVDPARGSVLLMGLLSPLMHALAQGLQSTTPDEPAISEALQQLAQAVRFLDVRDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQS-QHISTELVRTLWPMLEAVPGRMGGSPEVMRQLFLLVGKLLTSLRMVLARQVHIPTLLKMIMDSYDEHQYPCCLDIMTTAVEVYGSTDEAMEHFRALLGRASTRTFTVVQ 965          
BLAST of mRNA_H-canaliculatus_F_contig12657.2221.1 vs. uniprot
Match: A0A835YMS8_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS8_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.130e-57
Identity = 171/461 (37.09%), Postives = 233/461 (50.54%), Query Frame = 0
Query:    1 QGVKDVLVVIYYIFRADYLSHVMERLKARPESWQALEVTLLAVTLVSKEIRDWMDAHARSKDAEQAEDASRTHALVSALVNELLVNARLSSVPLVLAAGCKLVGSFATLVGGGRYGRRRFGSIGNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGGNSDPSLLPRALSYLSAGLQQSTSRDRAAISVRTVAASCERAIVTNPAALEALLQTLDVATRAGADVEERLTLMEASVRVLPAVDPSRASALLMGLLSPLMHTLAQGLQSTAPDEQAISETLQLLAQAVRFLDVRDTPPAPPPGSQXXXXXTGTRSPPVGPGQPGSXXXXXXXXXXXXXXXXGDGGHAPQHISTEFVRALWPMLEAVPRRMGASPEVIRQLFLLVGKLLTSLRMELAQQVHIPTLLKMIMDSYDERQYPCCLDVMTTAVEVY-GAADEAVEPFRALLGRASTRTFTAVQ 460
             G+KDVLVV+YY+ RA YL  V++RL+ R  SWQA+E  LLAVT V+KE+R W+ +    K AE + DA R+  L+  L+ EL++N+ +SS PLVLAAGC+LVG+F++L+                                                       +P L+P AL YL  GL+ +TSR  AA ++R   A+CERA+  + AA+E LL  L       A VE+++ + EA  RVL A++P+RAS L+    +PL+              Q + +  ++L Q VRFLD      APP    XXXXX    S                            G HA      E +++L P+++AV  R   S EV+ QLFLLVGK L+SLR   A Q HIP  L +++D      YPCCL+ M TAVEVY G + + VE F  LL R    TFT  Q
Sbjct:  508 HGIKDVLVVVYYLLRAQYLERVLQRLQQRQSSWQAVEACLLAVTHVAKEVRSWISSP--EKTAEGSADAQRSRDLLQGLIQELVLNSAISSHPLVLAAGCRLVGAFSSLL---------------------------------------------THRASTAPQDNPLLVP-ALRYLCTGLRDATSRAAAAAALRGACAACERAVAASDAAVEVLLPQLQAVN---APVEQQVEVAEAGARVLAALEPARASQLIALFAAPLL--------------QDVKQVTEVLTQIVRFLD------APPAXXXXXXXXXXXXS----------------------------GAHA----CAELLQSLRPLVDAVAGRCQGSEEVMAQLFLLVGKALSSLRSLPALQAHIPAFLNIMLD-----HYPCCLECMGTAVEVYSGESAQVVEHFGQLLARVCAETFTYFQ 860          
BLAST of mRNA_H-canaliculatus_F_contig12657.2221.1 vs. uniprot
Match: A0A061RMX8_9CHLO (Importin N-terminal domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RMX8_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 7.570e-7
Identity = 106/484 (21.90%), Postives = 191/484 (39.46%), Query Frame = 0
Query:    1 QGVKDVLVVIYYIFRADYLSHVMERLKARPESWQALEVTLLAVTLVSKEIRDWMDAHARSKDAEQAEDASR--THALVSALVNELLVNARLSSV----PLVLAAGCKLVGSFATLVGGGRYGRRRFGSIGNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGGNSDPSLLPRALSYLSAGLQQSTSRDR---AAISVRTVAASCERAIVTNPAALEALLQTLD--VATRAGADVEERLTLMEASVRVLPAVDPSRASALLMGLLSPLM---HTLA--QGLQSTAPDEQ------AISETLQLLAQAVRFLDVRDTPPAPPPGSQXXXXXTGTRSPPVGPGQPGSXXXXXXXXXXXXXXXXGDGGHAPQHISTEFVRALWPMLEAVPR--RMGASPEVIRQLFLLVGKLLTSLRMELAQQVHIPTLLKMIMDSYDERQYPCCLDVMTTAVEVYGAADEAVEPFRALLGRASTRTFTAVQ 460
            Q + D L   Y + R +YL  +   + A  ++WQ  E  L A+  ++  ++  + +  ++     A  A R  T A +    +++  +A  ++V     LV+ A C+LVG++A            FGS                                         +++  +LP AL YL   L      D    AA +VR + A C +A++ +P +L+ L+  +D  +A + G  +E+R  ++E   R++  + P  A+   + L+ PL+   H +A  +G Q+ A          A+S+ L+L+A AVRF+D                                                 GDG     H +T  V ALWP+L +     R  +S  V+  +  +  + + SL+   A  +    ++  ++       +P CL  + T  EV+G  D+A E   + L   + R  + +Q
Sbjct:  403 QILTDALDNCYGLLRLEYLQSIGSMMAAA-DTWQKAEACLFALRCIALSVKSRILSERKADLVNPAIQAERADTSAFLLFAFSKVFESADANTVFWSHLLVIEAACRLVGAYAAW----------FGS-----------------------------------------SAEAPVLP-ALRYLLRVLAVRGHGDXXXXAAAAVRNLCARCSKALL-DPPSLKGLMDAVDPVIAGQPGLKLEDRQAVVEGLARLVSLLPPGEAAQACIRLVGPLVARAHAVATSEGAQAAAAGASHEEHAAALSDELELIASAVRFMDF-----------------------------------------------PGDGLEGQPHPATGAVEALWPVLSSAADSPRWSSSAAVVAAVCSVYQRCVLSLKASAAPLLQ--PMVARLVSLLGAGNHPPCLAALGTCAEVFGPMDDAQEILTSALSAVAERALSRLQ 783          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12657.2221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLY0_9PHAE9.170e-18878.51Importin N-terminal domain-containing protein n=2 ... [more]
A0A835YMS8_9STRA1.130e-5737.09Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A061RMX8_9CHLO7.570e-721.90Importin N-terminal domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 165..460
coord: 3..108
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..435

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12657contigH-canaliculatus_F_contig12657:7..3157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12657.2221.1mRNA_H-canaliculatus_F_contig12657.2221.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12657 7..3157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12657.2221.1 ID=prot_H-canaliculatus_F_contig12657.2221.1|Name=mRNA_H-canaliculatus_F_contig12657.2221.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=461bp
QGVKDVLVVIYYIFRADYLSHVMERLKARPESWQALEVTLLAVTLVSKEI
RDWMDAHARSKDAEQAEDASRTHALVSALVNELLVNARLSSVPLVLAAGC
KLVGSFATLVGGGRYGRRRFGSIGNAAAVAAAAAAAGAPGGVGGGGGGPA
AGVGGRGGMGLGGNSDPSLLPRALSYLSAGLQQSTSRDRAAISVRTVAAS
CERAIVTNPAALEALLQTLDVATRAGADVEERLTLMEASVRVLPAVDPSR
ASALLMGLLSPLMHTLAQGLQSTAPDEQAISETLQLLAQAVRFLDVRDTP
PAPPPGSQAAAAATGTRSPPVGPGQPGSGAATATGLAAGAGGGVGDGGHA
PQHISTEFVRALWPMLEAVPRRMGASPEVIRQLFLLVGKLLTSLRMELAQ
QVHIPTLLKMIMDSYDERQYPCCLDVMTTAVEVYGAADEAVEPFRALLGR
ASTRTFTAVQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold