prot_H-canaliculatus_F_contig1265.2218.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1265.2218.1
Unique Nameprot_H-canaliculatus_F_contig1265.2218.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length168
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1265.2218.1 vs. uniprot
Match: A0A6H5JWC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC9_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 5.170e-37
Identity = 88/164 (53.66%), Postives = 100/164 (60.98%), Query Frame = 0 
Query:    4 GLSTRVRGSWFVSLNASDLSHLSVPLTPHEPRPAAXXXXXXXXXXXXXXXXXXXXXXXXTSASSDRFDAGSGMILHKKGRVGACAWVECRSAASRDALVDVVRAWAQHAETKGKGRGKSKGQSAPTLRVELGSVAQLSAEAFGGERRGRKMPTLTDERQACLLW 167
            GL+T  RGSW+V LNA DLSHLSVPL P EPR A+                          A SD      G+ILHK+G +GA AWVECRSAASRDALVD V AWA+ A TKG         ++ + RVE  S A LSAE FGGERRGRK+ +LTDERQAC LW
Sbjct:  653 GLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGAS-------------------------GARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDHVSAWARAAGTKGT--------ASRSFRVEPRSSAHLSAE-FGGERRGRKVASLTDERQACPLW 782
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BLAST of mRNA_H-canaliculatus_F_contig1265.2218.1 vs. uniprot
Match: D7FZ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ63_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 6.680e-35
Identity = 85/163 (52.15%), Postives = 96/163 (58.90%), Query Frame = 0 
Query:    4 GLSTRVRGSWFVSLNASDLSHLSVPLTPHEPRPAAXXXXXXXXXXXXXXXXXXXXXXXXTSASSDRFDAGSGMILHKKGRVGACAWVECRSAASRDALVDVVRAWAQHAETKGKGRGKSKGQSAPTLRVELGSVAQLSAEAFGGERRGRKMPTLTDERQACLL 166
            GL+T  RGSW+V LNA DLSHLSVPL P EP  A                           A SD      G+ILHK+G +GA AWVECRSAASRDALVD V AWA+ A TKG         ++ + RVE  S A LSA  FGGERRGRK+ +LTDERQAC L
Sbjct:  280 GLTTSARGSWYVGLNACDLSHLSVPLAPTEPWGAC-------------------------GARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDQVSAWARAAGTKGT--------ASRSFRVEPRSSAHLSA-GFGGERRGRKVASLTDERQACPL 408
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1265.2218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWC9_9PHAE5.170e-3753.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ63_ECTSI6.680e-3552.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1265contigH-canaliculatus_F_contig1265:19735..20238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1265.2218.1mRNA_H-canaliculatus_F_contig1265.2218.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1265 18540..20280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1265.2218.1 ID=prot_H-canaliculatus_F_contig1265.2218.1|Name=mRNA_H-canaliculatus_F_contig1265.2218.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=168bp
MLYGLSTRVRGSWFVSLNASDLSHLSVPLTPHEPRPAAAAAATAAAIAAA
VRRSSSAATPAATSASSDRFDAGSGMILHKKGRVGACAWVECRSAASRDA
LVDVVRAWAQHAETKGKGRGKSKGQSAPTLRVELGSVAQLSAEAFGGERR
GRKMPTLTDERQACLLW*
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