prot_H-canaliculatus_F_contig1265.2217.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1265.2217.1
Unique Nameprot_H-canaliculatus_F_contig1265.2217.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length642
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1265.2217.1 vs. uniprot
Match: A0A6H5JWC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC9_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.310e-30
Identity = 134/346 (38.73%), Postives = 171/346 (49.42%), Query Frame = 0 
Query:  151 ESGQIKVMFRRHEFSSTRGKGLGLTVSPAKDARDTGRVPRGARIEEAEG--CADAGGPLQ-----SSTPLRPGDLLAEV-----NGQDVRRLPFSEVLRLLNAPTPHIITTTAPSXXXXXXXXXXXHTTIGSMFGSSSNIGSPARPPSLHSGNVAKILRGS-LSSAPGGPRTPGSGNGQSTAPPSTNRSXXXXXXXXXXXXALAPVSPLACPGSPLGLCSSSKTPRRFAPLLTDLRRKSWRRKFYGRW--GGGXXXXXXXXXXXXXXXXXXXXXTCTGAASFFS-STEATPTNTHSSSFSSKQMPSLDPWGGDPPGDKPSR-MHRTRSMINSTLGRMSPR-GILSP 478
            E+GQ+ V+  R  FSS+                 TG V  GARI+E +   C D     +     +S+ + P  LL+++     + QDVRRLP S  +RLL  P  H+ITTTA              ++ G+   +SSN  S A+      G V + L G+ LS++  GPR+PGS NGQ TAPPSTNRS            AL  +SP   P SP    S  +TPR  APLLTD+RR SWR K   R   GGG                         ++ FFS S  ATP N   +S   +   SL+PWGG  PG KPSR M RTRSMIN+T GRMS R  ++SP
Sbjct:   85 EAGQMAVVVGRDGFSSS-----------------TGGVAGGARIKEKQHGVCFDCHPQHEERRAATSSTVSPAGLLSDILSSDTDAQDVRRLPSSGDVRLLKPPIAHVITTTAKIDSMFRGNL----SSGGTNSNNSSNSHSQAK-QEYGLGTVPRTLGGAALSASAVGPRSPGSSNGQYTAPPSTNRSTARAPSTPPSPAALGTISPTTRPYSPRRSISI-RTPRALAPLLTDVRRVSWRLKSSRRSSVGGGGRKNRAKDGL---------------SSGFFSPSPSATPRN---ASSQKQATGSLNPWGGGTPGGKPSRTMSRTRSMINNTFGRMSLRVPVISP 389
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1265.2217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JWC9_9PHAE2.310e-3038.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 153..265
e-value: 6.1E-9
score: 37.8
IPR001478PDZ domainPROSITEPS50106PDZcoord: 156..239
score: 9.793
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 168..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1265contigH-canaliculatus_F_contig1265:13485..18476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1265.2217.1mRNA_H-canaliculatus_F_contig1265.2217.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1265 12463..18476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1265.2217.1 ID=prot_H-canaliculatus_F_contig1265.2217.1|Name=mRNA_H-canaliculatus_F_contig1265.2217.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=642bp
MASDASSNCAMDVKASTDTPGRNRRGGRRSLSDRLRFRTRAFSASTLGTA
AGALSKAPGAASPTEPRDSVATSGESEASTMDASPMAERARVLRCRDKRS
CSTSGARAGPCGDASTSHHRQRGLLSGAAPAASARAAGTVVGSGLRQGVR
ESGQIKVMFRRHEFSSTRGKGLGLTVSPAKDARDTGRVPRGARIEEAEGC
ADAGGPLQSSTPLRPGDLLAEVNGQDVRRLPFSEVLRLLNAPTPHIITTT
APSTTSTSSNSSSSHTTIGSMFGSSSNIGSPARPPSLHSGNVAKILRGSL
SSAPGGPRTPGSGNGQSTAPPSTNRSRAAAASTPPSPAALAPVSPLACPG
SPLGLCSSSKTPRRFAPLLTDLRRKSWRRKFYGRWGGGGGGSKTDRAGFK
GFKGSKGSKTCTGAASFFSSTEATPTNTHSSSFSSKQMPSLDPWGGDPPG
DKPSRMHRTRSMINSTLGRMSPRGILSPWATEALQTKSFNVVPVVPPPPA
TPQSPVAAPPSPAGASPREKTLDPHRESPAPRTTINDSALLNPRVLLSER
REAAHGGVGGAGAAGRRCSTLRYSLSLPQGDGWFGIGDADHSEDDSEEEE
EGDVEEYSMVRQLSRETAMSSSSAFFPSDSEDDFFAKGEEDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ