prot_H-canaliculatus_F_contig1265.2216.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1265.2216.1
Unique Nameprot_H-canaliculatus_F_contig1265.2216.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length253
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1265.2216.1 vs. uniprot
Match: D7FZ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ62_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.090e-30
Identity = 98/214 (45.79%), Postives = 121/214 (56.54%), Query Frame = 0 
Query:    7 SSPETDVEDWSEDTLSSSPQHAGYLPLDHYD--GLEDDQQXXXXXXXXXXXXXXXQADDTSIEETLAGGDASSRQPDIASAILRAMEADYRACVESEERLTSNGPIAPSSTSVHTTAEIPTQEHGQ-VEDNGTLSRERDDSSPDREERGSESMGGVPPP---------RPISPLGQDQAERVMRAMQGFALAAPALSPVRFEVDWGSPDALANL 208
            S+P TD E WS++T   SP+H GY  LD Y   G E D+ XXXXXXX                  +   D +S QPD+AS +LRAME DYRACVESE  + SNGPIA ++T+   T + P++E  Q +E NGTL+  +                              RP+SPLGQD+AERV+RAMQGF LAAP+L P  FE DWG P ALANL
Sbjct:    7 STPTTDGEHWSDET-EGSPEHTGYAALDQYQPLGEEGDEXXXXXXXXGTEEQRTESVGGEGWPAGVVDVD-TSLQPDMASVLLRAMEEDYRACVESEGHVVSNGPIA-AATAATETRKPPSEEPAQQLEGNGTLTPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXATMRPVSPLGQDRAERVIRAMQGFTLAAPSLPPAPFEADWGHPSALANL 217
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1265.2216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ62_ECTSI1.090e-3045.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1265contigH-canaliculatus_F_contig1265:7506..11275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1265.2216.1mRNA_H-canaliculatus_F_contig1265.2216.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1265 7377..11969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1265.2216.1 ID=prot_H-canaliculatus_F_contig1265.2216.1|Name=mRNA_H-canaliculatus_F_contig1265.2216.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=253bp
MGDPDTSSPETDVEDWSEDTLSSSPQHAGYLPLDHYDGLEDDQQEEQEGQ
QGQEEQEEQQADDTSIEETLAGGDASSRQPDIASAILRAMEADYRACVES
EERLTSNGPIAPSSTSVHTTAEIPTQEHGQVEDNGTLSRERDDSSPDREE
RGSESMGGVPPPRPISPLGQDQAERVMRAMQGFALAAPALSPVRFEVDWG
SPDALANLTGPTAGTAATSTTGAPAAPVGPAAPAAPAAPAAPAARRGRVE
ET*
back to top