prot_H-canaliculatus_F_contig1262.2198.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1262.2198.1
Unique Nameprot_H-canaliculatus_F_contig1262.2198.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length75
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1262.2198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 12..71
e-value: 2.0E-9
score: 37.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..74
e-value: 5.5E-26
score: 93.1
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 1..73
NoneNo IPR availablePANTHERPTHR46662:SF10coord: 1..73
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1262contigH-canaliculatus_F_contig1262:9696..11392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1262.2198.1mRNA_H-canaliculatus_F_contig1262.2198.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1262 9696..11392 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1262.2198.1 ID=prot_H-canaliculatus_F_contig1262.2198.1|Name=mRNA_H-canaliculatus_F_contig1262.2198.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=75bp
GSIPKEIGKLTALTCLNLDSNKFSGSIPKELGGLTALKFLILSDNSLSGS
IPRELGRLSALEELHLDGNRFSGE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt