prot_H-canaliculatus_F_contig12610.2193.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12610.2193.1
Unique Nameprot_H-canaliculatus_F_contig12610.2193.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length361
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12610.2193.1 vs. uniprot
Match: D7FTS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS6_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 2.040e-78
Identity = 193/361 (53.46%), Postives = 223/361 (61.77%), Query Frame = 0 
Query:    2 EQRGVLISEKRDKAAQVDEMRQGLRRMRLAARLGVAARDLAQETVKIPREAIGRVIGKKRAALTQLEKECRVSVTEEAPRFEPAAPRRQPGVSSPDSNPPSSTCGSGSSXXXXXXXXXXXXXXXXXXXXXXXXGGPLLLHVSGTREGVAEAGRRLDLTIRNTETVLTAAPPLAAALRVSKRALLLRIEGEFRVKIF-VGTASVVPGSGVGXXXXXXXXXXXXXXXXXXXQPEHQPRERVSAGAISGAVAAXXXSGRVVKVTISGLPENVELARAYVAELDCLELVVPVERKSLSAICGVERANIQQMESDFGVFLEAPKGVPRVVLMGVREDVEAAAEKIREISYEFRETEQRWTVEPHQV 361
            +QR VL +EKRDK AQ+ EMRQGLRR+RLA RLGVA RDLAQE++++PREA GRVIGKKRAALTQLE+ECRVS+  E                                                              +VSGTREGV EA RRLD+TIR TE V+ A+PPLAAALR SKRALLLR+E E  VKIF VG A+        XXXXXXXXXXXXXXXXXXX                G VA        V VT+ GLP+ ++ ARA +  LDCLEL VPV RKSL +I G   AN+QQMES++GV L+   GV RVVLMGVR  VEAAAEKIR IS+EFR+TE+RW VEP+QV
Sbjct:   99 DQRAVLFAEKRDKTAQMAEMRQGLRRLRLADRLGVAPRDLAQESIEVPREATGRVIGKKRAALTQLEEECRVSIVTE--------------------------------------------------------------NVSGTREGVEEARRRLDITIRTTEAVVKASPPLAAALRASKRALLLRLEKEHGVKIFIVGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGQVA--------VDVTVCGLPKEIDAARAELEGLDCLELAVPVTRKSLPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLMGVRAGVEAAAEKIRAISHEFRDTEERWPVEPYQV 389
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BLAST of mRNA_H-canaliculatus_F_contig12610.2193.1 vs. uniprot
Match: A0A6H5L0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D2_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 7.300e-73
Identity = 205/363 (56.47%), Postives = 242/363 (66.67%), Query Frame = 0 
Query:    2 EQRGVLISEKRDKAAQVDEMRQGLRRMRLAARLGVAARDLAQETVKIPREAIGRVIGKKRAALTQLEKECRVSVTEEAPRFEPAAPRRQPGVSSPDSNPPSSTCGSGSSXXXXXXXXXXXXXXXXXXXXXXXXGGPLLLHVSGTREGVAEAGRRLDLTIRNTETVLTAAPPLAAALRVSKRALLLRIEGEFRVKIFV--GTASVVPGSGVGXXXXXXXXXXXXXXXXXXXQPEHQPRERVSAGAISGAVAAXXXSGRV-VKVTISGLPENVELARAYVAELDCLELVVPVERKSLSAICGVERANIQQMESDFGVFLEAPKGVPRVVLMGVREDVEAAAEKIREISYEFRETEQRWTVEPHQV 361
            +QR +L +EKRDK AQ+ EMRQGLRR+RLA RLGVA RDLAQE++++PREA GRVIGKKRAALTQLE+ECRV +  E  R                       CGS ++          XXXXXXXXXXX      L+LH+SGTREGV EA RRLD+TIR TE V+ A+P LAAALR S+RALLLR+E E  VKIF+    A         XXXXXXXXXXXXXXXXXXX                     XXX G+V V VT+ GLP+ ++ ARA +  LDCLEL VPV RK+L +I G   AN+QQMES++GV L+   GV RVVLMGVR  VEAAAEKIR IS+EFR+TE+RW VEP+QV
Sbjct:   99 DQRAMLFTEKRDKTAQMAEMRQGLRRLRLADRLGVAPRDLAQESIEVPREATGRVIGKKRAALTQLEEECRVLIVTENNRV----------------------CGSTAAARIWPDKPHGXXXXXXXXXXXDT----LILHLSGTREGVEEARRRLDVTIRTTEAVVKASPALAAALRASRRALLLRLEKEHGVKIFIVGPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQVAVDVTVCGLPKGIDAARAELEGLDCLELAVPVTRKALPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLMGVRAGVEAAAEKIRAISHEFRDTEERWPVEPYQV 435
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BLAST of mRNA_H-canaliculatus_F_contig12610.2193.1 vs. uniprot
Match: A0A835Z3V4_9STRA (KH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V4_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.000e-6
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:    1 QEQRGVLISEKRDKAAQVDEMRQGLRRMRLAARLGVAARDLAQETVKIPREAIGRVIGKKRAALTQLEKECRV 73
            Q++ G LI E +    +V+E+ +GL ++ LA + GV   DL   TV +P + IGR+IG+ RAAL  LEK+C V
Sbjct:  188 QDKVGALIEESKANTEKVNELSRGLAKVHLAVKAGVGVADLVTATVHVPSDKIGRIIGRSRAALADLEKDCGV 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12610.2193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTS6_ECTSI2.040e-7853.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0D2_9PHAE7.300e-7356.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3V4_9STRA2.000e-643.84KH domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 333..353
IPR004087K Homology domainSMARTSM00322kh_6coord: 40..161
e-value: 2.1E-6
score: 37.3
coord: 280..345
e-value: 0.048
score: 22.8
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 44..78
e-value: 9.5E-5
score: 22.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 280..352
e-value: 3.5E-6
score: 28.5
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 283..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12610contigH-canaliculatus_F_contig12610:405..2933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12610.2193.1mRNA_H-canaliculatus_F_contig12610.2193.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12610 405..2933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12610.2193.1 ID=prot_H-canaliculatus_F_contig12610.2193.1|Name=mRNA_H-canaliculatus_F_contig12610.2193.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=361bp
QEQRGVLISEKRDKAAQVDEMRQGLRRMRLAARLGVAARDLAQETVKIPR
EAIGRVIGKKRAALTQLEKECRVSVTEEAPRFEPAAPRRQPGVSSPDSNP
PSSTCGSGSSSAVRAGGTGSGNGGGGGGGGGGTGGGPLLLHVSGTREGVA
EAGRRLDLTIRNTETVLTAAPPLAAALRVSKRALLLRIEGEFRVKIFVGT
ASVVPGSGVGDGAGGSGSADRPVGGGGGGQPEHQPRERVSAGAISGAVAA
GAASGRVVKVTISGLPENVELARAYVAELDCLELVVPVERKSLSAICGVE
RANIQQMESDFGVFLEAPKGVPRVVLMGVREDVEAAAEKIREISYEFRET
EQRWTVEPHQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR004087KH_dom