prot_H-canaliculatus_F_contig12602.2185.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12602.2185.1
Unique Nameprot_H-canaliculatus_F_contig12602.2185.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length232
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12602.2185.1 vs. uniprot
Match: A0A6H5LAU8_9PHAE (CXXC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU8_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 8.520e-58
Identity = 143/220 (65.00%), Postives = 159/220 (72.27%), Query Frame = 0 
Query:    1 GCLHRVEYGGSGHRNQPCVERWCRTKAAQRDGEKTDKA-KRMRAMTDGG-GAGTKRPLEPNSGRDYEGR----DFPADQGKRFRRRIAKVGGVSAIAEGRRTPTAVPPGP---GGDYSGLSFVFAGEGQGGDGGSAPPRANHEAVHVATESAAIVLSA---GLVGXXXXXXXXTKTRPSSRSRRSALKDLLGKGYRCLALLEELGALPLLKSAADVVRGG 208
            GC HRVEYGGSG RNQPCV+RWCRTKAAQR+ +K DKA +R RAM  GG G GTKRPLE +SG DYEG     D  AD  KRFRRR  K  G +A A GR +PT  P GP   GGDYSGLS+VFAGE         P R NHEA HV+ ESA IVLSA   G+  XXXXXXXX + RPSSRSRRS LK+LLGKGYRCLALLEELGA PLL +A +V++ G
Sbjct:  943 GCQHRVEYGGSGQRNQPCVDRWCRTKAAQRESDKLDKAARRKRAMAVGGSGVGTKRPLE-SSGEDYEGDYGGGDVYAD--KRFRRRTTK--GTAAAAAGRTSPT--PTGPAVSGGDYSGLSYVFAGEXXXXXXXXLP-RPNHEAAHVSAESAGIVLSAVGGGVXXXXXXXXXXXRARPSSRSRRSGLKNLLGKGYRCLALLEELGARPLLSAAGEVLQEG 1154
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BLAST of mRNA_H-canaliculatus_F_contig12602.2185.1 vs. uniprot
Match: D7G6J0_ECTSI (CXXC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J0_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 2.040e-50
Identity = 132/224 (58.93%), Postives = 144/224 (64.29%), Query Frame = 0 
Query:    1 GCLHRVEYGGSGHRNQPCVERWCRTKAAQRDGEKTDKA-KRMRAMTDGG-GAGTKRPLEPNSGRDYEGR----DFPADQGKRFRRRIAKVGGVSAIAEGRRTPTAVPPGP------GGDYSGLSFVFAGEGQGGDGGSAPPRANHEAVHVATESAAIVLSA--GLVGXXXXXXXXT--KTRPSSRSRRSALKDLLGKGYRCLALLEELGALPLLKSAADVVRGG 208
            GC HR+EYGGSG RNQPCV+RWCRTKAAQR+ +K DKA +R RAM  GG G GTKRPLE  SG DYEG     D  AD  KRFRRR  K  G +A                     GGDYSGLS+VFAGE         P R NHEA HV  ESA IVLSA  G VG     XXX   + RPSSRSRRS LKDLLGKGYRCLALLEELGA PLL +A +V++ G
Sbjct:  590 GCQHRIEYGGSGQRNQPCVDRWCRTKAAQRESDKLDKAARRKRAMAVGGSGVGTKRPLEA-SGEDYEGDYGGGDVFAD--KRFRRRTPK--GTAAXXXXXXXXXXXXXXXXXXXVSGGDYSGLSYVFAGEXXXXXXXGLP-RPNHEAAHVLAESAGIVLSAVGGGVGGASSSXXXXXXRARPSSRSRRSGLKDLLGKGYRCLALLEELGARPLLSAAGEVLQEG 807
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12602.2185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAU8_9PHAE8.520e-5865.00CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6J0_ECTSI2.040e-5058.93CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12602contigH-canaliculatus_F_contig12602:1208..3291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12602.2185.1mRNA_H-canaliculatus_F_contig12602.2185.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12602 1206..3291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12602.2185.1 ID=prot_H-canaliculatus_F_contig12602.2185.1|Name=mRNA_H-canaliculatus_F_contig12602.2185.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=232bp
GCLHRVEYGGSGHRNQPCVERWCRTKAAQRDGEKTDKAKRMRAMTDGGGA
GTKRPLEPNSGRDYEGRDFPADQGKRFRRRIAKVGGVSAIAEGRRTPTAV
PPGPGGDYSGLSFVFAGEGQGGDGGSAPPRANHEAVHVATESAAIVLSAG
LVGGGGGGSSSTKTRPSSRSRRSALKDLLGKGYRCLALLEELGALPLLKS
AADVVRGGEVEGKKEGHATGRGGGGKDKGKCK
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