prot_H-canaliculatus_F_contig1259.2172.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1259.2172.1
Unique Nameprot_H-canaliculatus_F_contig1259.2172.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length44
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1259.2172.1 vs. uniprot
Match: D7FVS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS5_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 5.210e-15
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0 
Query:    1 MIDRAKSQVLHKLTETKKGVIAPTQALLQDRDNCVKALLKAEEK 44
            MIDRAKSQVL+KL + KK VIAPTQALLQDRD+CVKAL+KAEEK
Sbjct:   83 MIDRAKSQVLNKLADIKKTVIAPTQALLQDRDSCVKALVKAEEK 126
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1259.2172.1 vs. uniprot
Match: A0A836CPR2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.460e-7
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 0 
Query:    1 MIDRAKSQVLHKLTETKKGVIAPTQALLQDRDNCVKALLKAE 42
            + DRA+ QVL KLTE +  VIAPT+ALL+DRD C+++L+KAE
Sbjct:   83 LCDRAEQQVLAKLTEVQTRVIAPTKALLKDRDECIQSLVKAE 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1259.2172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVS5_ECTSI5.210e-1584.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CPR2_9STRA1.460e-761.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1259contigH-canaliculatus_F_contig1259:18375..19795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1259.2172.1mRNA_H-canaliculatus_F_contig1259.2172.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1259 17959..19795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1259.2172.1 ID=prot_H-canaliculatus_F_contig1259.2172.1|Name=mRNA_H-canaliculatus_F_contig1259.2172.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=44bp
MIDRAKSQVLHKLTETKKGVIAPTQALLQDRDNCVKALLKAEEK
back to top