prot_H-canaliculatus_F_contig1258.2163.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1258.2163.1
Unique Nameprot_H-canaliculatus_F_contig1258.2163.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length97
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1258.2163.1 vs. uniprot
Match: D8LR47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR47_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 8.440e-31
Identity = 62/97 (63.92%), Postives = 72/97 (74.23%), Query Frame = 0 
Query:    2 LLGSCCFLQAVQAS--ATMRFMEHLHGSAGASSSPDGGGDEQQLFVSKRAWVEDRACTRLSRTPHIITKRKQQPPWFFSTVVMAEGFYSPEVAAISC 96
            LL +   + +VQAS  A MRFMEHLHGS   S SPD GG+  QL+VSKRAWVEDRACTRLSRTPH+IT    Q  WF + V MAEGFYS +VAA++C
Sbjct:    6 LLAAGIVVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLYVSKRAWVEDRACTRLSRTPHLITT--SQSTWFPTAVEMAEGFYSADVAALAC 100
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1258.2163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR47_ECTSI8.440e-3163.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1258contigH-canaliculatus_F_contig1258:4176..6545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1258.2163.1mRNA_H-canaliculatus_F_contig1258.2163.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1258 4176..6545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1258.2163.1 ID=prot_H-canaliculatus_F_contig1258.2163.1|Name=mRNA_H-canaliculatus_F_contig1258.2163.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=97bp
LLLGSCCFLQAVQASATMRFMEHLHGSAGASSSPDGGGDEQQLFVSKRAW
VEDRACTRLSRTPHIITKRKQQPPWFFSTVVMAEGFYSPEVAAISC*
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