prot_H-canaliculatus_F_contig1250.2120.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1250.2120.1
Unique Name	prot_H-canaliculatus_F_contig1250.2120.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	337

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1250.2120.1 vs. uniprot
Match: D7FUT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT7_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 4.240e-98
Identity = 187/339 (55.16%), Postives = 224/339 (66.08%), Query Frame = 0

Query:    1 MLSYGSCALLAETAVFLILAAVSLWEYHRSTQQSAV-RHQQGRGAHMTLLQTEEAESGNNGTKARHQINLTLACACTARAILTAFLSLSNSWLPYLAVPDLLYIALYFFIIVLLAQMRQMNKNQDLKLFKSVRLCLLLSLAGVLIASLVVCTARWATDPLSKKSLFLRKFLYLELGVTYLVMFATFIYFGVRVCICVAAPNKRLFYRILVLTLVCGAAMSTKGAFFVAAAANDSDTDALFPDSAGSGRFEALIALEELLPSITIAYLTARGKGRRSRAQQVLGQSEIAESAALVTQQRWDGRTQLYNTNMDGGIVSQETPGARYIHFS---YGSSGLNQ 335
            M+S+GSC LL E  VFLILA VS WE+H S Q+SAV RHQ  RG  MT           NGT+ARHQ N  LA ACTA+AI    +  +  W+P+ AV DLLYIAL+  +I+L  +MR  N        ++VRL + LSLAGVL+ SLV+CTARWA DP S+KSL LRKFLYLELG+TYL MF  F+YFGVRVC+ VAAPNKRL +R+LVLT VCG AM +KGA  VAAA N+SDT ALFP S G  R EAL+ALEEL+PSI IAYLTARGKGRR RAQ +      +E   L    R D           GG+V   T G R + +S   YG S +++
Sbjct:    1 MVSFGSCVLLLEAGVFLILAVVSGWEFHWSRQESAVARHQDQRGGGMTXXXXXXXXXXXNGTRARHQTNFILAGACTAKAISLGVVWGTGGWVPFTAVSDLLYIALFGSLILLYVEMR--NILAVASSHRTVRLGVFLSLAGVLVVSLVICTARWAADPASRKSLALRKFLYLELGITYLAMFVAFMYFGVRVCVGVAAPNKRLLHRVLVLTAVCGLAMCSKGALLVAAALNNSDTSALFPPSLGRYRLEALMALEELVPSIAIAYLTARGKGRRYRAQVL-----PSERTGLA---RCDSLDYSSINFTYGGMVPSGTSGTRVVPYSPLLYGPSSIDE 329

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1250.2120.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1250.2120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FUT7_ECTSI	4.240e-98	55.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 203..230
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 86..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 269..336
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 197..202
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 250..268
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..85
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 175..196
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 28..66
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 133..155
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 156..174
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 114..132
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 231..249
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..27
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..113
None	No IPR available	TMHMM	TMhelix		coord: 246..268
None	No IPR available	TMHMM	TMhelix		coord: 133..155
None	No IPR available	TMHMM	TMhelix		coord: 170..192
None	No IPR available	TMHMM	TMhelix		coord: 91..113
None	No IPR available	TMHMM	TMhelix		coord: 204..226
None	No IPR available	TMHMM	TMhelix		coord: 2..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1250	contig	H-canaliculatus_F_contig1250:11907..18952 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1250.2120.1	mRNA_H-canaliculatus_F_contig1250.2120.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1250 9514..19290 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1250.2120.1 ID=prot_H-canaliculatus_F_contig1250.2120.1|Name=mRNA_H-canaliculatus_F_contig1250.2120.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=337bp
MLSYGSCALLAETAVFLILAAVSLWEYHRSTQQSAVRHQQGRGAHMTLLQ
TEEAESGNNGTKARHQINLTLACACTARAILTAFLSLSNSWLPYLAVPDL
LYIALYFFIIVLLAQMRQMNKNQDLKLFKSVRLCLLLSLAGVLIASLVVC
TARWATDPLSKKSLFLRKFLYLELGVTYLVMFATFIYFGVRVCICVAAPN
KRLFYRILVLTLVCGAAMSTKGAFFVAAAANDSDTDALFPDSAGSGRFEA
LIALEELLPSITIAYLTARGKGRRSRAQQVLGQSEIAESAALVTQQRWDG
RTQLYNTNMDGGIVSQETPGARYIHFSYGSSGLNQA*