prot_H-canaliculatus_F_contig12484.2102.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12484.2102.1
Unique Nameprot_H-canaliculatus_F_contig12484.2102.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length75
Homology
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 2.770e-38
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPE  AEDLVFAGDNFIR
Sbjct:  298 FQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPETAAEDLVFAGDNFIR 369          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.350e-33
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +QGRVARQGGLGGAQM TTVRNLRIREDRAKYLYNLDP+SAYYDPKTRAMR+NP P AN E+L +AGDNF+R
Sbjct:  261 FQGRVARQGGLGGAQMATTVRNLRIREDRAKYLYNLDPDSAYYDPKTRAMRENPNPSANPEELAYAGDNFMR 332          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A6G0RVC6_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RVC6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.360e-32
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    6 RVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R
Sbjct:    5 RVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYVGDNIAR 73          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A7S2MS38_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MS38_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.760e-32
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 LAWQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            + +Q R+ARQGG+GGAQMKTTVRNLRIRED AKYL NLDPNSAYYDPKTR+MRDNP+P  N E++ +AGDNF R
Sbjct:  161 IDFQKRIARQGGIGGAQMKTTVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPLPNENPEEVQYAGDNFSR 234          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A6A3U154_9STRA (Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U154_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.620e-31
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    6 RVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            RVARQGG+GGAQMKTTVRNLRIR+D AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R
Sbjct:    5 RVARQGGVGGAQMKTTVRNLRIRDDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYVGDNIAR 73          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A7S1UIW3_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIW3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.730e-31
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +QGRVARQGG+GGAQM TTVRNLR+RED AKYL NLDPNSAYYDPK+RAMRDNP+P  +   LV+AGDNF+R
Sbjct:   71 FQGRVARQGGVGGAQMFTTVRNLRVREDTAKYLLNLDPNSAYYDPKSRAMRDNPLPHMDPNKLVYAGDNFVR 142          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A7S2V1R9_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1R9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.900e-31
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +QGRVARQGGLGGAQMKTTVRNLRIRED AKYL NLDPNSA+YDPKTR+MR NP P  +AE+ ++AGDN++R
Sbjct:  254 FQGRVARQGGLGGAQMKTTVRNLRIREDTAKYLRNLDPNSAFYDPKTRSMRANPTPHLDAENTLYAGDNWVR 325          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: W7TVH6_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVH6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.990e-31
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +QGRVARQGG+GGAQMK +VRNLRIRED AKYL NLDPNSAYYDPKTRAMRDNP+P  + E+L +AGDN++R
Sbjct:  241 FQGRVARQGGVGGAQMKVSVRNLRIREDTAKYLRNLDPNSAYYDPKTRAMRDNPLPGTHPEELAYAGDNYVR 312          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A7S2SN22_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN22_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.280e-30
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +Q R+ARQGG+GGAQMKTTVRNLRIRED AKYL NLDPNSAYYDPKTR+MRDNP+P  N ED+ FAGDN+ R
Sbjct:  311 FQKRIARQGGVGGAQMKTTVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPLPAENPEDIPFAGDNYQR 382          
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Match: A0A7R9U7Z6_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z6_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.550e-30
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    3 WQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 74
            +QGRVARQGGLGGAQM TTVRNLR+RED+AKYL NLDPNSAYYDPK+R+MR+NP+P  +    V+AGDNFIR
Sbjct:  259 FQGRVARQGGLGGAQMATTVRNLRLREDKAKYLLNLDPNSAYYDPKSRSMRENPLPHLDPAQAVYAGDNFIR 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12484.2102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU41_ECTSI2.770e-3895.83Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus T... [more]
A0A836CLD5_9STRA1.350e-3384.72Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema mi... [more]
A0A6G0RVC6_9STRA1.360e-3279.71Pre-mRNA-splicing factor SLU7 n=2 Tax=Phytophthora... [more]
A0A7S2MS38_9STRA6.760e-3275.68Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=D... [more]
A0A6A3U154_9STRA1.620e-3178.26Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora... [more]
A0A7S1UIW3_9STRA4.730e-3177.78Pre-mRNA-splicing factor SLU7 n=1 Tax=Phaeomonas p... [more]
A0A7S2V1R9_9STRA4.900e-3177.78Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=F... [more]
W7TVH6_9STRA6.990e-3177.78Pre-mRNA-splicing factor SLU7 n=2 Tax=Monodopsidac... [more]
A0A7S2SN22_9STRA1.280e-3079.17Pre-mRNA-splicing factor SLU7 n=2 Tax=Rhizochromul... [more]
A0A7R9U7Z6_9STRA3.550e-3076.39Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021715Pre-mRNA-splicing factor SLU7 domainPFAMPF11708Slu7coord: 16..74
e-value: 1.1E-27
score: 97.5
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 16..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12484contigH-canaliculatus_F_contig12484:275..499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12484.2102.1mRNA_H-canaliculatus_F_contig12484.2102.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12484 275..499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12484.2102.1 ID=prot_H-canaliculatus_F_contig12484.2102.1|Name=mRNA_H-canaliculatus_F_contig12484.2102.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=75bp
LAWQGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTR
AMRDNPMPEANAEDLVFAGDNFIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039974Splicing_factor_SLU7
IPR021715Slu7_dom