prot_H-canaliculatus_F_contig12465.2090.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12465.2090.1
Unique Nameprot_H-canaliculatus_F_contig12465.2090.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length117
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12465.2090.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.940e-14
Identity = 77/163 (47.24%), Postives = 82/163 (50.31%), Query Frame = 0 
Query:    1 MMAGLARQSQMLAVYIGLEDAPDVSA-------SSATDA---------------------------------------DPGADRVSNRKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANR 117
            MMAGLARQS  LAVY+GLED P+ SA       SS T +                                       D  A  +  + PPA    XXXXXXXXXX                  ASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANR
Sbjct: 1086 MMAGLARQSHTLAVYLGLEDVPEASAHHTHPPFSSLTFSVTIRRGGGHEQPSPFNTXXXXXXXXXXXXXXXXXXXXXXDGDAASIIRKPPPALQPRXXXXXXXXXXPVIVALTLRLKVLALA--ASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANR 1246
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BLAST of mRNA_H-canaliculatus_F_contig12465.2090.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 2.800e-12
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:   79 ASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANR 117
            ASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANR
Sbjct: 1212 ASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANR 1250
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12465.2090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNJ9_9PHAE4.940e-1447.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBI8_ECTSI2.800e-12100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 60..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12465contigH-canaliculatus_F_contig12465:117..1257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12465.2090.1mRNA_H-canaliculatus_F_contig12465.2090.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12465 102..1257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12465.2090.1 ID=prot_H-canaliculatus_F_contig12465.2090.1|Name=mRNA_H-canaliculatus_F_contig12465.2090.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=117bp
MMAGLARQSQMLAVYIGLEDAPDVSASSATDADPGADRVSNRKPPAPAPQ
PRTEEERRRAAAPVIIALTLRLKVLALAASRGLGASYPAFAGGAAVPALA
GLVEILAFGLAKAGANR
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