prot_H-canaliculatus_F_contig12437.2071.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12437.2071.1
Unique Nameprot_H-canaliculatus_F_contig12437.2071.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length515
Homology
BLAST of mRNA_H-canaliculatus_F_contig12437.2071.1 vs. uniprot
Match: D8LNT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT1_ECTSI)

HSP 1 Score: 672 bits (1734), Expect = 2.280e-229
Identity = 367/523 (70.17%), Postives = 397/523 (75.91%), Query Frame = 0
Query:    1 SKLRNSARSWNMPDEVCSDLSWPGLCLEDLSADR---LDSSGAPLLVHTSGPQNSHLALLRPRPPRFGVPPSTPSGRGRRKGCVDGTAAATPRGVDGEEAS----ASSAVELEDRLALHAGPIRQISAVAPRANAPPRVFARCEYTATLVSACKVVDRLCPAGDTGLAAA--RRIRRAKVAAGVPVAADGSEEAEAAARVGQHVGGXXXXXXXDREQGQRGQEEVDFDGFEEVEKLVFARRLTCTACSPFTPSHAAFLDEEFRLFHWHADRGAVAHGPGPLPIDTPPGAAVGFPRSEADDRRRRHADVALDYGSHPRVLWIAGRHRAYRVDLREKPSPAALTPALDPGVYYGKFKDDQIINGGPGRLGGRGKAPKVRSLAVGRRSAYDVFVAAGLHLACMDVRFPTDVVARWDLPQEVDQLRWLPGVPGEDLEGEGAQIILASGRRSPGFYVNTWARDVPGWRGCQARLGLDDTSPAASAARRPLTMSLPATPLSEGETRGGGLLLALPPERRGSGAAS-GDG 513
            SKLR+SARSW+MPD VCSDLSWPG CLE+LSA +   L S  APLL H SGP+NSHLALLRPR    G  PSTPSGR   KGCVDGTA   P G D E  +    AS+A+EL+DRLALHAGPIRQISAVAPRANA P VF RC+Y+ATL +ACKV DRL   G         RR+RRAKVAAG+PVAAD +             G                +EE DFDGFEE EKLVF+RRLTC ACSPFTP +AAFLDEE RLF WH++RGAV HG GPLPI  PPGA    P   A  RR R+ADVALDYGSHPRVLW+AGRHRAYRVDLRE PSPAAL PALDPGVY+  F D  I++GGPGR GGRG+ P VRSLAVGRRSA+DVFVAAGLHLACMD RFP  VVARWDLPQEVDQLRWLPGVPGE  E E  +I+LASGRRSPGFYVNTWARDVPGWRG QARLGLDDTSPAASAARRPLT SLPATPLSEGETR GGLLL L P  RGS AA+ GDG
Sbjct:   91 SKLRSSARSWDMPDTVCSDLSWPGSCLENLSAGQELGLSSPAAPLLAHASGPENSHLALLRPRQACRGGSPSTPSGRNSGKGCVDGTA--DPGGPDVEAGAGSNDASAAIELKDRLALHAGPIRQISAVAPRANARPTVFVRCDYSATLATACKVKDRLDHLGGYNARGVYERRLRRAKVAAGLPVAADSAAXXXXXXXXXXREGE---------------EEESDFDGFEEGEKLVFSRRLTCVACSPFTPKNAAFLDEELRLFSWHSERGAVTHGAGPLPIVAPPGAPE-RPSLAAKVRRARNADVALDYGSHPRVLWVAGRHRAYRVDLRENPSPAALAPALDPGVYFTGFSDLSIVDGGPGRFGGRGEEPSVRSLAVGRRSAHDVFVAAGLHLACMDARFPKSVVARWDLPQEVDQLRWLPGVPGERAE-EAEEIVLASGRRSPGFYVNTWARDVPGWRGYQARLGLDDTSPAASAARRPLTFSLPATPLSEGETRSGGLLLGLAPGGRGSSAAAVGDG 594          
BLAST of mRNA_H-canaliculatus_F_contig12437.2071.1 vs. uniprot
Match: A0A6H5L1M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M6_9PHAE)

HSP 1 Score: 650 bits (1676), Expect = 9.040e-222
Identity = 354/509 (69.55%), Postives = 386/509 (75.83%), Query Frame = 0
Query:   12 MPDEVCSDLSWPGLCLEDLSADR---LDSSGAPLLVHTSGPQNSHLALLRPRPPRFGVPPSTPSGRGRRKGCVDGTAAATPRGVDGEEAS----ASSAVELEDRLALHAGPIRQISAVAPRANAPPRVFARCEYTATLVSACKVVDRLCPAGDTGLAAA--RRIRRAKVAAGVPVAADGSEEAEAAARVGQHVGGXXXXXXXDREQGQRGQEE-VDFDGFEEVEKLVFARRLTCTACSPFTPSHAAFLDEEFRLFHWHADRGAVAHGPGPLPIDTPPGAAVGFPRSEADDRRRRHADVALDYGSHPRVLWIAGRHRAYRVDLREKPSPAALTPALDPGVYYGKFKDDQIINGGPGRLGGRGKAPKVRSLAVGRRSAYDVFVAAGLHLACMDVRFPTDVVARWDLPQEVDQLRWLPGVPGEDLEGEGAQIILASGRRSPGFYVNTWARDVPGWRGCQARLGLDDTSPAASAARRPLTMSLPATPLSEGETRGGGLLLALPPERRGSGAAS 510
            MPD VCSDLSWPG CLE+LSA +   L S   PLL H SGP+NSHLALLRPR    G  PSTPSG    KGC DGTA   PRG D E  +    AS+A+EL+DRLALHAGPIRQISAVAPRANA P VF RC+Y+ATL +ACKV DRL   G         RR+RRAKVAAG+P AA+ S  A  AAR G                G+ G+EE +DFDGFEE EKLVF+RRLTC ACSPFTP +AAFLDEE RLF WH +RG V HG GPLPI  PPG     P   A  RR R+ADVALDYGSHPRVLW+AGRHRAYRVDLREKPSPAAL PALDPGVY+  F D  +++GGPGR GGRG+ P+VRSL VGRRSA+D+FVAAGLHLACMD RFP  VVARWDLPQEVDQLRWLPGVPGE  E E  +I+LASGRRSPGFYVNTWARDVPGWRG QARLGLDDTSPAASAARRPLT SLPATPLSEGETR GGLLL L P  RGS AA+
Sbjct:    1 MPDTVCSDLSWPGSCLENLSAGQELGLSSLAPPLLAHASGPENSHLALLRPRQACRGRSPSTPSGSNNGKGCADGTA--DPRGPDVETGAGSNDASAAIELKDRLALHAGPIRQISAVAPRANARPTVFVRCDYSATLATACKVKDRLDHLGGYNARGVYERRLRRAKVAAGLPAAAE-SAAAAPAARGGD---------------GREGEEEQLDFDGFEEDEKLVFSRRLTCVACSPFTPKNAAFLDEELRLFSWHPERGTVRHGAGPLPIAAPPGGPE-RPSLAAKARRARNADVALDYGSHPRVLWVAGRHRAYRVDLREKPSPAALAPALDPGVYFTGFSDLSVVDGGPGRFGGRGEEPRVRSLTVGRRSAHDIFVAAGLHLACMDSRFPKGVVARWDLPQEVDQLRWLPGVPGERAE-EAEEIVLASGRRSPGFYVNTWARDVPGWRGYQARLGLDDTSPAASAARRPLTFSLPATPLSEGETRSGGLLLGLAPGGRGSSAAA 489          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12437.2071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNT1_ECTSI2.280e-22970.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1M6_9PHAE9.040e-22269.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12437contigH-canaliculatus_F_contig12437:88..2777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12437.2071.1mRNA_H-canaliculatus_F_contig12437.2071.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12437 88..2777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12437.2071.1 ID=prot_H-canaliculatus_F_contig12437.2071.1|Name=mRNA_H-canaliculatus_F_contig12437.2071.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=515bp
SKLRNSARSWNMPDEVCSDLSWPGLCLEDLSADRLDSSGAPLLVHTSGPQ
NSHLALLRPRPPRFGVPPSTPSGRGRRKGCVDGTAAATPRGVDGEEASAS
SAVELEDRLALHAGPIRQISAVAPRANAPPRVFARCEYTATLVSACKVVD
RLCPAGDTGLAAARRIRRAKVAAGVPVAADGSEEAEAAARVGQHVGGGGG
GGGGDREQGQRGQEEVDFDGFEEVEKLVFARRLTCTACSPFTPSHAAFLD
EEFRLFHWHADRGAVAHGPGPLPIDTPPGAAVGFPRSEADDRRRRHADVA
LDYGSHPRVLWIAGRHRAYRVDLREKPSPAALTPALDPGVYYGKFKDDQI
INGGPGRLGGRGKAPKVRSLAVGRRSAYDVFVAAGLHLACMDVRFPTDVV
ARWDLPQEVDQLRWLPGVPGEDLEGEGAQIILASGRRSPGFYVNTWARDV
PGWRGCQARLGLDDTSPAASAARRPLTMSLPATPLSEGETRGGGLLLALP
PERRGSGAASGDGK*
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