prot_H-canaliculatus_F_contig1243.2064.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1243.2064.1
Unique Nameprot_H-canaliculatus_F_contig1243.2064.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length157
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1243.2064.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 8.090e-30
Identity = 78/143 (54.55%), Postives = 92/143 (64.34%), Query Frame = 0 
Query:   18 MADDWDDWGDEDDNSATDDA---SKFSEKSEGWDWPAPCVEKDSAAVAAPATAAGRAAQNNHDSKSTKLDAAAAEAEAREAREVAVEEIAEKYFSELQRYLEDLADPSVREEINQALTKRDYASLHRYYDGREDLADYTLDTE 157
            MADDWDDWGD+D   A  D    S  S+KSEGWDWP     K  +    PA A  +++Q+ +         AA E   REARE  V E+ EK+F EL+ YLE+LADPSVREEINQ L K D+AS  RYYDGR+DLA YTLDTE
Sbjct:    1 MADDWDDWGDDDGEVAVADGGDNSNSSDKSEGWDWPVAATTKPPS----PAIAIQQSSQDEN---------AAVE---REAREAVVAEMTEKFFVELRSYLENLADPSVREEINQELNKCDFASFTRYYDGRDDLATYTLDTE 127
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1243.2064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JKF0_9PHAE8.090e-3054.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1243contigH-canaliculatus_F_contig1243:17528..18780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1243.2064.1mRNA_H-canaliculatus_F_contig1243.2064.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1243 17527..18780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1243.2064.1 ID=prot_H-canaliculatus_F_contig1243.2064.1|Name=mRNA_H-canaliculatus_F_contig1243.2064.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp
GARRVRFVFSRCVVLRVMADDWDDWGDEDDNSATDDASKFSEKSEGWDWP
APCVEKDSAAVAAPATAAGRAAQNNHDSKSTKLDAAAAEAEAREAREVAV
EEIAEKYFSELQRYLEDLADPSVREEINQALTKRDYASLHRYYDGREDLA
DYTLDTE
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