prot_H-canaliculatus_F_contig1243.2062.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1243.2062.1
Unique Nameprot_H-canaliculatus_F_contig1243.2062.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length318
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1243.2062.1 vs. uniprot
Match: D8LSM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM8_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 3.060e-99
Identity = 215/320 (67.19%), Postives = 232/320 (72.50%), Query Frame = 0 
Query:    1 MLASATEVEVELDVPDDVSTFFGVTWAQDPREDKIFIKAFPRGSDGRRGILESTGLVELNDCLTAINGVALPKPSGLREVMASIRAAESPLSLRFARYPPAPLLR---KSSSTSPSVFSSSYPSSLASAAGAGILGPPSPGTXXXXXXXXXXXXXLGSPDATLGGTARSAGAAR----------------------------VDGERRELAAAADPDLDGVLNSALVLGLGERVADIQKRNTRLVQEMDRIGRAASGKRQGVERVASAAASLTAAGESLLPQ-ALRLLSTARQDAVALCEAMARLDELLAARERAQLARR 288
            MLASATEVEVEL VPDDVSTFFGVTWAQDPR++KIFIKAFPRG +GRRGILESTGLVEL+DCLTAINGV++ K S L EVMASIRAAESPLSLRFARYPP PL R    SS +SPS+FS S  +                  XXXXXXXXXXXXX+G          R  GA +                                RR+   AADPDLD VLNSALVLGLGERVADIQKRN+RL+QE+DRIGRAA+ KRQGVERVASAAASLTAAG  LLP+ ALRLLS ARQDAVALCEAMARLDELLAARERAQLARR
Sbjct:    1 MLASATEVEVELHVPDDVSTFFGVTWAQDPRKNKIFIKAFPRGPNGRRGILESTGLVELDDCLTAINGVSVDKSSALHEVMASIRAAESPLSLRFARYPPPPLQRCSPSSSLSSPSLFSPSPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIG----------RHIGAGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRD---AADPDLDAVLNSALVLGLGERVADIQKRNSRLLQEVDRIGRAAADKRQGVERVASAAASLTAAGSDLLPRRALRLLSAARQDAVALCEAMARLDELLAARERAQLARR 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1243.2062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM8_ECTSI3.060e-9967.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1243contigH-canaliculatus_F_contig1243:6945..10648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1243.2062.1mRNA_H-canaliculatus_F_contig1243.2062.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1243 5159..10966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1243.2062.1 ID=prot_H-canaliculatus_F_contig1243.2062.1|Name=mRNA_H-canaliculatus_F_contig1243.2062.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=318bp
MLASATEVEVELDVPDDVSTFFGVTWAQDPREDKIFIKAFPRGSDGRRGI
LESTGLVELNDCLTAINGVALPKPSGLREVMASIRAAESPLSLRFARYPP
APLLRKSSSTSPSVFSSSYPSSLASAAGAGILGPPSPGTGSLSSGSGGGG
GGLGSPDATLGGTARSAGAARVDGERRELAAAADPDLDGVLNSALVLGLG
ERVADIQKRNTRLVQEMDRIGRAASGKRQGVERVASAAASLTAAGESLLP
QALRLLSTARQDAVALCEAMARLDELLAARERAQLARRRSFEEEVGGRGW
RSLAGGGGGGFDYAGRR*
back to top