prot_H-canaliculatus_F_contig12414.2049.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12414.2049.1
Unique Name	prot_H-canaliculatus_F_contig12414.2049.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	137

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12414.2049.1 vs. uniprot
Match: D7FY12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY12_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 2.400e-36
Identity = 73/101 (72.28%), Postives = 90/101 (89.11%), Query Frame = 0

Query:   38 APTAVAVML--LPPPLPSLQLGCMYGYSLGPYLPAVLLCGIPLPFMSLISLSAAGILSVVFLLRALTPVLLERNVAVATPVMAGLGVLQVLFTLVIKIVFF 136
            AP AV ++L  +  P+P ++LGCMYGYSLGPYLPA+L+C +P+P+M+L++LSAAG LSVVFLLRALTPVLLERNVA+A+PVMAGLGVLQV+FTLVIK  FF
Sbjct:  149 APLAVWLVLNQMDLPVPLVKLGCMYGYSLGPYLPAILVCALPVPYMTLVALSAAGTLSVVFLLRALTPVLLERNVAMASPVMAGLGVLQVIFTLVIKFAFF 249

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BLAST of mRNA_H-canaliculatus_F_contig12414.2049.1 vs. uniprot
Match: W7TJY7_9STRA (Protein YIPF n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJY7_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.150e-9
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0

Query:   50 PLPSLQLGCMYGYSLGPYLPAVLLCGIPLPFMSLISLSAAGILSVVFLLRALTPVLLERNVAVATPVMAGLGVLQVLFTLVIKIVFF 136
            PLP +Q   +YGYSL  ++P  LL  IP P    +S  AA   SVVFLL+AL PV++E+    A P +A +G +Q+   L IK+VFF
Sbjct:  167 PLPLIQTVAIYGYSLVAFVPCTLLNFIPAPAFPWLSEIAAAAASVVFLLKALGPVVMEKAPQHAMPFLASIGAVQLALALTIKLVFF 253

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12414.2049.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12414.2049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FY12_ECTSI	2.400e-36	72.28	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
W7TJY7_9STRA	3.150e-9	45.98	Protein YIPF n=2 Tax=Monodopsidaceae TaxID=425072 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039765	Protein Yip5/YIPF1/YIPF2	PANTHER	PTHR12822	UNCHARACTERIZED	coord: 50..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..135
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 99..109
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 70..98
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..69
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 136..136
None	No IPR available	TMHMM	TMhelix		coord: 113..135
None	No IPR available	TMHMM	TMhelix		coord: 76..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12414	contig	H-canaliculatus_F_contig12414:2204..3543 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12414.2049.1	mRNA_H-canaliculatus_F_contig12414.2049.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12414 894..3555 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12414.2049.1 ID=prot_H-canaliculatus_F_contig12414.2049.1|Name=mRNA_H-canaliculatus_F_contig12414.2049.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp
MIRQGARTILSTKTCGNPPCPFPSSSYLFPGVHVPPSAPTAVAVMLLPPP
LPSLQLGCMYGYSLGPYLPAVLLCGIPLPFMSLISLSAAGILSVVFLLRA
LTPVLLERNVAVATPVMAGLGVLQVLFTLVIKIVFF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039765	Yip5/YIPF1/YIPF2