prot_H-canaliculatus_F_contig12375.2022.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12375.2022.1
Unique Nameprot_H-canaliculatus_F_contig12375.2022.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length129
Homology
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: D8LGR2_ECTSI (Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR2_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 6.010e-68
Identity = 104/127 (81.89%), Postives = 112/127 (88.19%), Query Frame = 0
Query:    1 VFRTLLSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRKLFAEAES-NDAEDASGVDD 126
            VFRTLLSVNWIRYKAGRKYPIPIKFIN DLN+NFRKGAYIRRL+THQ+ILLP+DPE VP+WLYLDLEFVRSGSKLRVSD+MMPEGI LHR  E  MWNEVVCTIKGRK+FA  +S  D ED   VDD
Sbjct:  165 VFRTLLSVNWIRYKAGRKYPIPIKFINSDLNENFRKGAYIRRLKTHQHILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPEGILLHRANEPGMWNEVVCTIKGRKVFASGDSAGDDEDEVFVDD 291          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: A0A485LRJ8_9STRA (Aste57867_24188 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRJ8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.120e-8
Identity = 31/103 (30.10%), Postives = 56/103 (54.37%), Query Frame = 0
Query:    6 LSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRK 108
            L+VN++RYK GRK  IP+ ++N + +   ++G YI  +R   +I      E++P  L++D+  +  G ++ + +I  PEG+             VV TI G++
Sbjct:  120 LTVNFLRYKPGRKVHIPLDYLNTEGSPGLKRGGYINNVR--HDIPCTIASEEIPAKLFVDVNGMHVGERIYLENITFPEGVT-----PLVKAKSVVATIAGKR 215          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: A0A3R6YZB1_9STRA (Ribosomal_TL5_C domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZB1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.940e-7
Identity = 32/102 (31.37%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    7 SVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRK 108
            SVN++RYK GRK  IP+ F+N + +   ++G YI  +  +  I      E +P  L++D+  +  G ++ + DI  PE +      +A     VV TI G++
Sbjct:  119 SVNFLRYKPGRKVHIPLDFLNQESSPGLKRGGYINNV--YHEIPCTIASEAIPTKLFVDVNGMHVGQRIYLEDITFPEHVTPLVKAKA-----VVATIAGKR 213          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: A0A6G0XNP1_9STRA (Ribosomal_TL5_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNP1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.030e-7
Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 0
Query:    6 LSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRK 108
            L+VN++RYK GRK  IP+ ++N + +   ++G YI  +R    I      E++P  LY+D+  +  G ++ + +I  PE ++            VV TI G++
Sbjct:  124 LTVNFLRYKPGRKVYIPLDYLNMEGSPGLKRGGYINNVR--HEIPCTISSEEIPAKLYVDVNGMHVGERIYLENITFPEHVK-----PLIKEKSVVATIAGKR 219          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: A0A024G2B8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2B8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.910e-7
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    6 LSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRKLFA 111
            L+VN+IRYK GRK  IPI +IN++ +   ++G YI  +       +  D  +VP+ L +D+  +   SK  +  I  P+GI       A     ++  IKGR++ A
Sbjct:  841 LTVNFIRYKHGRKVSIPITYINEEGSPGLKRGGYINHICHEVECYVNTD--QVPKTLEIDVNGLDVDSKFFLETISFPDGIV-----PAVPAGTLLANIKGRRIQA 939          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: F0WKB2_9STRA (50S ribosomal protein L25 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKB2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.470e-7
Identity = 33/114 (28.95%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    6 LSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRKLFAEAESNDAE 119
            L+VN+IRYK GRK  IPI +IN++ +   ++G YI  +  +  +    + E+VP+ L +D+  +   SK  +  I  P+G+             ++  +KGR++    E+ + E
Sbjct:  129 LTVNFIRYKNGRKVSIPITYINEEGSPGIKRGGYINHI--YHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPDGVV-----PVVPAGTLLANLKGRRILTLPEAAEDE 235          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: A0A482RSQ9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSQ9_9ARCH)

HSP 1 Score: 54.3 bits (129), Expect = 5.400e-7
Identity = 33/104 (31.73%), Postives = 56/104 (53.85%), Query Frame = 0
Query:    5 LLSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRK 108
            +LSVN++RY+AG    IPI+    D + + ++G Y+  ++   + ++ +    VPR L LDL     G   RV+++ +P  +R  RG +    + VV  IK  K
Sbjct:    5 ILSVNFLRYRAGVSLRIPIELRAADQSPDIKRGGYVVPVKPFLSCVVQEGAA-VPRSLPLDLSGALKGQVFRVANLSLPPCVRPARGEDG---DRVVAVIKAAK 104          
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Match: A0A397C844_9STRA (Ribosomal_TL5_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C844_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.470e-6
Identity = 32/102 (31.37%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    7 SVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNILLPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEVVCTIKGRK 108
            SVN++RYK GRK  IP+ F+N + +   ++G YI  +  +  I      E +P  LY+D+  +  G ++ + +I  PE +      E+     VV TI G++
Sbjct:  120 SVNFLRYKPGRKVHIPLDFLNQEGSPGLKRGGYINNV--YHEIPCTIASEVIPAKLYVDVNGMHVGERIYLENITFPEHVTPLVKPES-----VVATIAGKR 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12375.2022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LGR2_ECTSI6.010e-6881.89Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus... [more]
A0A485LRJ8_9STRA8.120e-830.10Aste57867_24188 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R6YZB1_9STRA2.940e-731.37Ribosomal_TL5_C domain-containing protein n=2 Tax=... [more]
A0A6G0XNP1_9STRA3.030e-730.10Ribosomal_TL5_C domain-containing protein n=1 Tax=... [more]
A0A024G2B8_9STRA3.910e-733.02Cleavage and polyadenylation specificity factor su... [more]
F0WKB2_9STRA4.470e-728.9550S ribosomal protein L25 putative n=1 Tax=Albugo ... [more]
A0A482RSQ9_9ARCH5.400e-731.73Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A397C844_9STRA1.470e-631.37Ribosomal_TL5_C domain-containing protein n=4 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 21..106
e-value: 3.5E-6
score: 27.3
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 17..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12375contigH-canaliculatus_F_contig12375:135..2522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12375.2022.1mRNA_H-canaliculatus_F_contig12375.2022.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12375 135..2522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12375.2022.1 ID=prot_H-canaliculatus_F_contig12375.2022.1|Name=mRNA_H-canaliculatus_F_contig12375.2022.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=129bp
VFRTLLSVNWIRYKAGRKYPIPIKFINDDLNDNFRKGAYIRRLRTHQNIL
LPDDPEKVPRWLYLDLEFVRSGSKLRVSDIMMPEGIRLHRGGEAAMWNEV
VCTIKGRKLFAEAESNDAEDASGVDDAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011035Ribosomal_L25/Gln-tRNA_synth
IPR020057Ribosomal_L25_b-dom